RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 AREL1O15033 823 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 WISP3O95389 354 aaPredicted RBP16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC9A3P48764 834 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ILF3Q12906 894 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■■■■■ 29
TRAF3IP1-201ENST00000373327 DEFB110Q30KQ9 67 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GTF2IRD2BQ6EKJ0 949 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FIGNL1Q6PIW4 674 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAM92BQ6ZTR7 304 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PRSS48Q7RTY5 328 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GTF2IRD2Q86UP8 949 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZNF433Q8N7K0 673 aaPredicted RBP16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR51A7Q8NH64 312 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR5P2Q8WZ92 322 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RIPOR3Q96MK2 946 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 NDUFAF4Q9P032 175 aa16.81■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PTHP01270 115 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GASTP01350 101 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HMGN2P05204 90 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC6A12P48065 614 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HNRNPA0Q13151 305 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HENMT1Q5T8I9 393 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAM83HQ6ZRV2 1179 aaPredicted RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR51G2Q8NGK0 314 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OTUB2Q96DC9 234 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TRNT1Q96Q11 434 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 NDEL1Q9GZM8 345 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 DLGAP1O14490 977 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CTDSP2O14595 271 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ITGB8P26012 769 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GP2P55259 537 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 STXBP1P61764 594 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 VEZF1Q14119 521 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MLIPQ5VWP3 458 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ARL9Q6T311 187 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ENTHD1Q8IYW4 607 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GGHQ92820 318 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MAPKAP1Q9BPZ7 522 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 LGR4Q9BXB1 951 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PCBD2Q9H0N5 130 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SIRT5Q9NXA8 310 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CDH7Q9ULB5 785 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 TMA7Q9Y2S6 64 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GFYI3L273 518 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLCO2B1O94956 709 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR5F1O95221 314 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PCGF2P35227 344 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 LIPAP38571 399 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 AQP6Q13520 282 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RUNX3Q13761 415 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FCRLBQ6BAA4 426 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ASB18Q6ZVZ8 466 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GALNT12Q8IXK2 581 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PEX5LQ8IYB4 626 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 UBTD2Q8WUN7 234 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAM46AQ96IP4 442 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR5M11Q96RB7 305 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MCHR1Q99705 422 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 HDHD5Q9BXW7 423 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAIMQ9NVQ4 179 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 WDR45Q9Y484 360 aa16.8■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FAM240BA0A1B0GVZ2 78 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 EIF3FO00303 357 aaPredicted RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 B4GALT2O60909 372 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZNF821O75541 412 aaPredicted RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ZNF10P21506 573 aaPredicted RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MC3RP41968 323 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC15A1P46059 708 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CDH11P55287 796 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GABARAPL2P60520 117 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 KIAA0040Q15053 153 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PRRT3Q5FWE3 981 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CCNJQ5T5M9 372 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ADGRD2Q7Z7M1 963 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 DUS3LQ96G46 650 aaKnown RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 C16orf58Q96GQ5 468 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 LRIG1Q96JA1 1093 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC23A2Q9UGH3 650 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 WDR90Q96KV7 1748 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 PDCD11Q14690 1871 aaKnown RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CCRL2O00421 344 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 GPX2P18283 190 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RHCEP18577 417 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CSRP3P50461 194 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 MESP2Q0VG99 397 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SPHARQ15513 63 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC30A6Q6NXT4 461 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SRFBP1Q8NEF9 429 aaKnown RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 OR8J2Q8NGG1 315 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 SLC38A5Q8WUX1 472 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 STARD5Q9NSY2 213 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CLDND1Q9NY35 253 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 H0YIV9 168 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 RNASET2O00584 256 aaKnown RBP16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 FHP07954 510 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ALOX5P09917 674 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 ITIH1P19827 911 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 IDUAP35475 653 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 P2RY2P41231 377 aa16.79■□□□□ 0.28
TRAF3IP1-201ENST00000373327 CDK3Q00526 305 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms