RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 PPP2R1BP30154 601 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 MPIP34949 423 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 CCR5P51681 352 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 DUSP2Q05923 314 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 TMEM64Q6YI46 380 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 OR13F1Q8NGS4 319 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 NT5CQ8TCD5 201 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 PHF10Q8WUB8 498 aaKnown RBP16.89■□□□□ 0.29
CTSA-204ENST00000372484 PITX2Q99697 317 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 GSDMCQ9BYG8 508 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 CCDC90BQ9GZT6 254 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 CPNE7Q9UBL6 633 aa16.89■□□□□ 0.29
CTSA-204ENST00000372484 TDRD6O60522 2096 aaKnown RBP16.89■□□□□ 0.29
CTSA-204ENST00000372484 A0A0J9YVX5 310 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 A0A1W2PS29 197 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 MBTPS2O43462 519 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 TNFSF14O43557 240 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 CTSVO60911 334 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 KHKP50053 298 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 TMEM107Q6UX40 140 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 ZNF605Q86T29 641 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 GPR32P1Q8NGA4 272 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 SFXN5Q8TD22 340 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 APOBEC4Q8WW27 367 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 RASSF5Q8WWW0 418 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 HRASLS5Q96KN8 279 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 COL21A1Q96P44 957 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 OR2A5Q96R48 311 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 KLHL25Q9H0H3 589 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 RASSF1Q9NS23 344 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 RHCGQ9UBD6 479 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 SEC14L3Q9UDX4 400 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 POFUT2Q9Y2G5 429 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 GON4LQ3T8J9 2241 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 PRAMEF27A3QJZ7 478 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 PCDH17O14917 1159 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 SERPINB7O75635 380 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 POU3F3P20264 500 aaPredicted RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 ANXA11P50995 505 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 HMGA2P52926 109 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 CXCR4P61073 352 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 DYNC1I2Q13409 638 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 LASP1Q14847 261 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 MAD2L1BPQ15013 274 aaPredicted RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 FIGLAQ6QHK4 219 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 CCDC71Q8IV32 467 aaPredicted RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 OR9Q2Q8NGE9 314 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 UTP15Q8TED0 518 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 ZFPM2Q8WW38 1151 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 OTUB1Q96FW1 271 aaPredicted RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 CNDP2Q96KP4 475 aaKnown RBP16.88■□□□□ 0.29
CTSA-204ENST00000372484 NIPSNAP1Q9BPW8 284 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 YIPF4Q9BSR8 244 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 TWSG1Q9GZX9 223 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 LHPPQ9H008 270 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 ZNF556Q9HAH1 456 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 POT1Q9NUX5 634 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 SCN3BQ9NY72 215 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 PSME2Q9UL46 239 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 TPRKBQ9Y3C4 175 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 ZNF780BQ9Y6R6 833 aa16.88■□□□□ 0.29
CTSA-204ENST00000372484 SEC14L2O76054 403 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 HMGN2P05204 90 aaKnown RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 FHP07954 510 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 THEGLP0DJG4 465 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 NR2F6P10588 404 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 LIMS1P48059 325 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 LIM2P55344 173 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 NUP107P57740 925 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 SMAD4Q13485 552 aaKnown RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 FCRL6Q6DN72 434 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 TAGAPQ8N103 731 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 ZCCHC10Q8TBK6 192 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 UBE2FQ969M7 185 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 MOAP1Q96BY2 351 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 TM4SF19Q96DZ7 209 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 RSPO3Q9BXY4 272 aaPredicted RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 PCDHGA6Q9Y5G7 932 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 SPTY2D1-AS1A0A0U1RR47 76 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 A8MVJ9 347 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 E9PQ18 207 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 TNRC18O15417 2968 aaPredicted RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 P2RX6O15547 441 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 CCNB2O95067 398 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 CELA2BP08218 269 aaPredicted RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 SRFP11831 508 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 JUNDP17535 347 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 FUT4P22083 530 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 KCNJ5P48544 419 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 GSSP48637 474 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 PRR5P85299 388 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 EIF2B5Q13144 721 aaKnown RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 TUBA3CQ13748 450 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 SUZ12Q15022 739 aaKnown RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 PROX2Q3B8N5 592 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 Q6ZPB1 254 aaPredicted RBP16.87■□□□□ 0.29
CTSA-204ENST00000372484 TAF8Q7Z7C8 310 aa16.87■□□□□ 0.29
CTSA-204ENST00000372484 KRT73Q86Y46 540 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms