RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 PRKD3O94806 890 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 GPR75O95800 540 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 ANKRD34CP0C6C1 535 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 CPMP14384 443 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 PEX2P28328 305 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 FOLH1Q04609 750 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 SCARB2Q14108 478 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 LRRC23Q53EV4 343 aaPredicted RBP24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 SZRD1Q7Z422 152 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 ADCY4Q8NFM4 1077 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 OR9A2Q8NGT5 310 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 TBC1D20Q96BZ9 403 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 ELP4Q96EB1 424 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 FANCEQ9HB96 536 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 PDP2Q9P2J9 529 aa24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 ATXN7L1Q9ULK2 861 aaPredicted RBP24.74■■□□□ 1.55
ATPAF1-202ENST00000371937 A0A1W2PQM1 296 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 H3BMH7 237 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 EMC8O43402 210 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 TPST1O60507 370 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 B4GALT2O60909 372 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 PPP2R1BP30154 601 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 ANXA11P50995 505 aaKnown RBP24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 NUBP1P53384 320 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 CDK6Q00534 326 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 COL9A2Q14055 689 aaPredicted RBP24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 CLPPQ16740 277 aaPredicted RBP24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 LRRC36Q1X8D7 754 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 TLDC1Q6P9B6 456 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 ENPP6Q6UWR7 440 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 TMEM107Q6UX40 140 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 OR4N5Q8IXE1 308 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 FAM110BQ8TC76 370 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 IFI44Q8TCB0 444 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 SLC35G5Q96KT7 338 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 AGPAT4Q9NRZ5 378 aa24.73■■□□□ 1.55
ATPAF1-202ENST00000371937 FAM227AF5H4B4 570 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 ARAFP10398 606 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 FOLR1P15328 257 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 ZNF574Q6ZN55 896 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 HORMAD2Q8N7B1 307 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 COL26A1Q96A83 441 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 MVB12AQ96EY5 273 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 MMABQ96EY8 250 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 SLC47A1Q96FL8 570 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 PYURFQ96I23 114 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 CUTCQ9NTM9 273 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 HCN3Q9P1Z3 774 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 C15orf41Q9Y2V0 281 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 CASC3O15234 703 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 CAPNS1P04632 268 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 ITGA1P56199 1179 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 RPS26P62854 115 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 GRAMD1BQ3KR37 738 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 TNFAIP8L2Q6P589 184 aaPredicted RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 ZC3H7AQ8IWR0 971 aaKnown RBP24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 TMEM52Q8NDY8 209 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 OR1L3Q8NH93 324 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 MAGED4Q96JG8 741 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 SEMA6AQ9H2E6 1030 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 A4GALTQ9NPC4 353 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 LRRC42Q9Y546 428 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 PCDHGB2Q9Y5G2 931 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 R4GN57 208 aa24.72■■□□□ 1.55
ATPAF1-202ENST00000371937 KMT2EQ8IZD2 1858 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 FGF17O60258 216 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 LDB3O75112 727 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 ZNF682O95780 498 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 MC3RP41968 323 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 TXNL4AP83876 142 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 EEF1A2Q05639 463 aaKnown RBP24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 PLA2G2CQ5R387 149 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 HMBOX1Q6NT76 420 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 TMPRSS9Q7Z410 1059 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 AMIGO2Q86SJ2 522 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 FAM86B1Q8N7N1 296 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 NFKBIDQ8NI38 313 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 DNAJC9Q8WXX5 260 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 ASPSCR1Q9BZE9 553 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 FGF21Q9NSA1 209 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 ANGPT4Q9Y264 503 aa24.71■■□□□ 1.55
ATPAF1-202ENST00000371937 PLOD2O00469 737 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 SLITRK5O94991 958 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 ATP1B1P05026 303 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 MATN1P21941 496 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 GRK6P43250 576 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 PRKAG1P54619 331 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 YOD1Q5VVQ6 348 aaPredicted RBP24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 TCEAL6Q6IPX3 200 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 CBLL1Q75N03 491 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 CCDC80Q76M96 950 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 EIF3MQ7L2H7 374 aaKnown RBP24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 ARHGAP22Q7Z5H3 698 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 ZNF595Q8IYB9 648 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 TCEAL3Q969E4 200 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 CENPNQ96H22 339 aaPredicted RBP24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 ZNF184Q99676 751 aaPredicted RBP24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 NDC1Q9BTX1 674 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 ADPRHL2Q9NX46 363 aa24.7■■□□□ 1.55
ATPAF1-202ENST00000371937 VPS13AQ96RL7 3174 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms