RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 B3GNT7Q8NFL0 401 aa27.38■■□□□ 1.97
SSBP3-204ENST00000371320 UCK2Q9BZX2 261 aa27.38■■□□□ 1.97
SSBP3-204ENST00000371320 MKRN2Q9H000 416 aaKnown RBP27.38■■□□□ 1.97
SSBP3-204ENST00000371320 PRDM8Q9NQV8 689 aa27.38■■□□□ 1.97
SSBP3-204ENST00000371320 FBXO8Q9NRD0 319 aa27.38■■□□□ 1.97
SSBP3-204ENST00000371320 SEMA3GQ9NS98 782 aa27.38■■□□□ 1.97
SSBP3-204ENST00000371320 PRAMEF27A3QJZ7 478 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 MAN2B1O00754 1011 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 RNGTTO60942 597 aaKnown RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 H1F0P07305 194 aaKnown RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 ELAVL4P26378 380 aaKnown RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 SEC23BQ15437 767 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 OR6Q1Q8NGQ2 317 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 FGF14Q92915 247 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 MS4A6EQ96DS6 147 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 APOOQ9BUR5 198 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 CLN6Q9NWW5 311 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 ATG2AQ2TAZ0 1938 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 SH3D21A4FU49 640 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 PRR19A6NJB7 356 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 CACNB4O00305 520 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 SCAMP1O15126 338 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 PLRG1O43660 514 aaKnown RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 OXSR1O95747 527 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 HOXB3P14651 431 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 PPP2R1BP30154 601 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 MAT2AP31153 395 aaKnown RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 KIR2DL1P43626 348 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 DGKEP52429 567 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 ABATP80404 500 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 LEXMQ3ZCV2 418 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 FAM92BQ6ZTR7 304 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 OR4D11Q8NGI4 311 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 OR8K5Q8NH50 307 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 DHRS1Q96LJ7 313 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 CDCA3Q99618 268 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 C1QTNF7Q9BXJ2 289 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 FZD3Q9NPG1 666 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 OSGIN1Q9UJX0 560 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 MGAT4BQ9UQ53 548 aa27.37■■□□□ 1.97
SSBP3-204ENST00000371320 GPC6Q9Y625 555 aaPredicted RBP27.37■■□□□ 1.97
SSBP3-204ENST00000371320 CKAP5Q14008 2032 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 DSPPQ9NZW4 1301 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 K7EQS6 105 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 FAAHO00519 579 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 OR10H3O60404 316 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ADORA3P0DMS8 318 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 PBX2P40425 430 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 HYAL2Q12891 473 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 RPE65Q16518 533 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 FBXO43Q4G163 708 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ZNF554Q86TJ5 538 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 KRT73Q86Y46 540 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 OR2L3Q8NG85 312 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ELSPBP1Q96BH3 223 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 RPP25Q9BUL9 199 aaKnown RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 BTBD2Q9BX70 525 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 SLIRPQ9GZT3 109 aaKnown RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 CCDC88CQ9P219 2028 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 EFCAB10A6NFE3 127 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 C4orf51C9J302 202 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 PRICKLE3O43900 615 aaPredicted RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ERAL1O75616 437 aaKnown RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 OSMP13725 252 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 HIST1H1TP22492 207 aaPredicted RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 GADD45AP24522 165 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 TNFRSF4P43489 277 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ABHD17CQ6PCB6 329 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 SLC46A3Q7Z3Q1 461 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 FBXL6Q8N531 539 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 TBC1D19Q8N5T2 526 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 FAM46DQ8NEK8 389 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 CRELD1Q96HD1 420 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 WFDC6Q9BQY6 131 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 TRMT61BQ9BVS5 477 aaKnown RBP27.36■■□□□ 1.97
SSBP3-204ENST00000371320 SLC6A17Q9H1V8 727 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 DCSTAMPQ9H295 470 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 ASB4Q9Y574 426 aa27.36■■□□□ 1.97
SSBP3-204ENST00000371320 PTHP01270 115 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 KHKP50053 298 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 PSMD7P51665 324 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 PRKAG1P54619 331 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 SMIM11AP58511 58 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 SYCE2Q6PIF2 218 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 ACOT4Q8N9L9 421 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 TMEM145Q8NBT3 493 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 LMAN2LQ9H0V9 348 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 ZBTB20Q9HC78 741 aaPredicted RBP27.35■■□□□ 1.97
SSBP3-204ENST00000371320 PRDM7Q9NQW5 492 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 REV1Q9UBZ9 1251 aa27.35■■□□□ 1.97
SSBP3-204ENST00000371320 A0A1W2PR48 441 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 PGRMC2O15173 223 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 GUCY1B2O75343 617 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 DNTTP04053 509 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 HNRNPCP07910 306 aaKnown RBP eCLIP27.34■■□□□ 1.972e-6■■■□□ 18.7
SSBP3-204ENST00000371320 AHRP35869 848 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TUBA1BP68363 451 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 LRRC32Q14392 662 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 IRF3Q14653 427 aa27.34■■□□□ 1.97
SSBP3-204ENST00000371320 TOR1AIP1Q5JTV8 583 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms