RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ACVR1BP36896 505 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 ID2Q02363 134 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 PMS2P3Q13401 168 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 UBE2UQ5VVX9 321 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 GKN2Q86XP6 184 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF808Q8N4W9 903 aaPredicted RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 TFGQ92734 400 aaPredicted RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 REEP4Q9H6H4 257 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 MRPL15Q9P015 296 aaKnown RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM98Q9Y2Y6 226 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 RNF215Q9Y6U7 377 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 BRINP1O60477 761 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 SNCGO76070 127 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 SLURP2P0DP57 97 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF30P17039 623 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 TIGD5Q53EQ6 642 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 OR4K14Q8NGD5 310 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 REV1Q9UBZ9 1251 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 NUP214P35658 2090 aaPredicted RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 KIAA0513O60268 411 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 ATG12O94817 140 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 SYNGR4O95473 234 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 POU4F2Q12837 409 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 C2CD4AQ8NCU7 369 aaPredicted RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 CMASQ8NFW8 434 aaPredicted RBP11.96□□□□□ -0.5
HCFC1-202ENST00000369984 PIP5K1AQ99755 562 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 DOHHQ9BU89 302 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 HS3ST4Q9Y661 456 aa11.96□□□□□ -0.5
HCFC1-202ENST00000369984 UNC119BA6NIH7 251 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 F8W036 122 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 KLF11O14901 512 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CDC123O75794 336 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 POP7O75817 140 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 GPX6P59796 221 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 BLOC1S1P78537 153 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SLC25A11Q02978 314 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 PIGFQ07326 219 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 EIF2B1Q14232 305 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SKA3Q8IX90 412 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SCML4Q8N228 414 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 DNTTIP1Q9H147 329 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 PCDHGA2Q9Y5H1 932 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 GXYLT2A0PJZ3 443 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 GABRA3P34903 492 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF423Q2M1K9 1284 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 MYLK3Q32MK0 819 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CARM1Q86X55 608 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CCDC116Q8IYX3 515 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 FTMTQ8N4E7 242 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 KRTCAP2Q8N6L1 136 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 RAB8BQ92930 207 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 POT1Q9NUX5 634 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 GOSR2O14653 212 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 HCRTR2O43614 444 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 IL1AP01583 271 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 POU6F2P78424 691 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 GINS1Q14691 196 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 HOXB13Q92826 284 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 KCNH6Q9H252 994 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 NSUN3Q9H649 340 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF334Q9HCZ1 680 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 B3GALT1Q9Y5Z6 326 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 INPPL1O15357 1258 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CAMLGP49069 296 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SGCAQ16586 387 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 PDZD9Q8IXQ8 264 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM151AQ8N4L1 468 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 METTL27Q8N6F8 245 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 OR8J3Q8NGG0 315 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 OR56B2PQ8NGI1 322 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM234Q8WY98 164 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 RRNAD1Q96FB5 475 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CCDC74BQ96LY2 380 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TMEM100Q9NV29 134 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 DUOX1Q9NRD9 1551 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SHOXO15266 292 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 FAM189A1O60320 539 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 CNOT4O95628 575 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 PTCHD3Q3KNS1 767 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 FBXL22Q6P050 247 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 KCTD18Q6PI47 426 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TXNDC5Q8NBS9 432 aaKnown RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 ZFAND2BQ8WV99 257 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 MKS1Q9NXB0 559 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 ZNF223Q9UK11 482 aaPredicted RBP11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SOCS2O14508 198 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 PCDH17O14917 1159 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TNFSF12O43508 249 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 TPPPO94811 219 aa11.95□□□□□ -0.5
HCFC1-202ENST00000369984 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms