RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 HRH2P25021 359 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 GSTM2P28161 218 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 IL12AP29459 219 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 PXNP49023 591 aaPredicted RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 CLDN8P56748 225 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 NRG3P56975 720 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ACTR3P61158 418 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 PSME3P61289 254 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ABATP80404 500 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 REEP5Q00765 189 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 TLE3Q04726 772 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 PRDX1Q06830 199 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 FZD2Q14332 565 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 KIR2DS5Q14953 304 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 KPNB1Q14974 876 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 SPATS1Q496A3 300 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 TIGD2Q4W5G0 525 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 NOXRED1Q6NXP6 359 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ARPINQ7Z6K5 226 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 TTLQ8NG68 377 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 SLC22A18Q96BI1 424 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 TESCQ96BS2 214 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 NMD3Q96D46 503 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 CDRT15Q96T59 188 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 POT1Q9NUX5 634 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 SIRT5Q9NXA8 310 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 GALNT8Q9NY28 637 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ARHGEF17Q96PE2 2063 aaPredicted RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 SCAMP1O15126 338 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 PDE5AO76074 875 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 CTSEP14091 401 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 SDC1P18827 310 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ME2P23368 584 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 APEX1P27695 318 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 CD38P28907 300 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ASMTP46597 345 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 C21orf58P58505 322 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 EIF2B5Q13144 721 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 PTGR1Q14914 329 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 TBC1D25Q3MII6 688 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 FLYWCH1Q4VC44 716 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 SAMD4BQ5PRF9 694 aaKnown RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 MSANTD1Q6ZTZ1 278 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 AMIGO1Q86WK6 493 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 NRROSQ86YC3 692 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 C2orf73Q8N5S3 287 aaPredicted RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 TBC1D19Q8N5T2 526 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 DPP10Q8N608 796 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 FRMD1Q8N878 549 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 OR4K1Q8NGD4 311 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 CCL4L1Q8NHW4 92 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 LCN9Q8WX39 176 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 LRRC58Q96CX6 371 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 C11orf24Q96F05 449 aaPredicted RBP8.3□□□□□ -1.08
TPM3-213ENST00000368545 SNX22Q96L94 193 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 APOLD1Q96LR9 279 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ACAT2Q9BWD1 397 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 RHBGQ9H310 441 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 ADA2Q9NZK5 511 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 MAGEL2Q9UJ55 1249 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 DLGAP4Q9Y2H0 992 aa8.3□□□□□ -1.08
TPM3-213ENST00000368545 IGF2RP11717 2491 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 ANKDD1BA6NHY2 528 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 C9JVG2 144 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SEMA3DO95025 777 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 XRCC1P18887 633 aaPredicted RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 PRPS1L1P21108 318 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 BCKDHBP21953 392 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 PSMB5P28074 263 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 CMPK1P30085 196 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TIA1P31483 386 aaKnown RBP eCLIP8.29□□□□□ -1.089e-11■■■■■ 30.9
TPM3-213ENST00000368545 RPS13P62277 151 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 CD69Q07108 199 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 NFYCQ13952 458 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 IYDQ6PHW0 289 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 HPS6Q86YV9 775 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 EGFL6Q8IUX8 553 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 AVL9Q8NBF6 648 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 OR2A1Q8NGT9 310 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 WDR60Q8WVS4 1066 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 SLC13A3Q8WWT9 602 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 VPS33AQ96AX1 596 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 CCDC124Q96CT7 223 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 GPATCH1Q9BRR8 931 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 CNPPD1Q9BV87 410 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 RNPEPL1Q9HAU8 725 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 MRPS30Q9NP92 439 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 TAAR2Q9P1P5 351 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 TMEM181Q9P2C4 612 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 ZNF624Q9P2J8 865 aaPredicted RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 ABCD2Q9UBJ2 740 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 APOBEC3BQ9UH17 382 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 POMPQ9Y244 141 aa8.29□□□□□ -1.08
TPM3-213ENST00000368545 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
TPM3-213ENST00000368545 THADAQ6YHU6 1953 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms