RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 EFNA1P20827 205 aaPredicted RBP9.39□□□□□ -0.91
TPM3-210ENST00000368530 PRPS1L1P21108 318 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 ATP6V1B2P21281 511 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 CXCR2P25025 360 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 DCTP40126 519 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 PIK3CBP42338 1070 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 GABRA4P48169 554 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 GSK3BP49841 420 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 PRDX1Q06830 199 aaKnown RBP9.39□□□□□ -0.91
TPM3-210ENST00000368530 NCF4Q15080 339 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 COMMD6Q7Z4G1 85 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 AMIGO1Q86WK6 493 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 RIMKLAQ8IXN7 391 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 ADGRF3Q8IZF5 1079 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 ABHD11Q8NFV4 315 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 NRG4Q8WWG1 115 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 CLIP3Q96DZ5 547 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 TRAPPC9Q96Q05 1148 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 F2RL3Q96RI0 385 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 KCTD14Q9BQ13 255 aaPredicted RBP9.39□□□□□ -0.91
TPM3-210ENST00000368530 SRMSQ9H3Y6 488 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 FAM60AQ9NP50 221 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 SLC6A20Q9NP91 592 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 SLAMF7Q9NQ25 335 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 SOHLH2Q9NX45 425 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 GPR83Q9NYM4 423 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 VAPAQ9P0L0 249 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 BCAP29Q9UHQ4 241 aa9.39□□□□□ -0.91
TPM3-210ENST00000368530 C15orf38-AP3S2A0A0A6YYH1 394 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 IGKV1-8A0A0C4DH67 115 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 H3BNX3 289 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 RTCAO00442 366 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 HAT1O14929 419 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 SEC16AO15027 2179 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 SCAMP2O15127 329 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 ZNF749O43361 778 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 LCMT2O60294 686 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 CNOT3O75175 753 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 CPSF4O95639 269 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 NPPAP01160 153 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 CTSBP07858 339 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 CHRM5P08912 532 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 HSD17B1P14061 328 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 PVRP15151 417 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 NCK1P16333 377 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 CDH3P22223 829 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 PTX3P26022 381 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 NDUFS1P28331 727 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 SHMT2P34897 504 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 HPCAL1P37235 193 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 CDKN2CP42773 168 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 KIR3DL1P43629 444 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 EEFSECP57772 596 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 CACNA1DQ01668 2161 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 RAPSNQ13702 412 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ZIC1Q15915 447 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 ARMC6Q6NXE6 501 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 LRRC74BQ6ZQY2 392 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ARPINQ7Z6K5 226 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 TRIM73Q86UV7 250 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 GPR180Q86V85 440 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 DHFR2Q86XF0 187 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 TICAM1Q8IUC6 712 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 MSRB3Q8IXL7 192 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 METTL4Q8N3J2 472 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 CISD2Q8N5K1 135 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 FLVCR1-AS1Q8TAF5 88 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 TESCQ96BS2 214 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ITCHQ96J02 903 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 LRGUKQ96M69 825 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 DPH2Q9BQC3 489 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 DPH7Q9BTV6 452 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 RHBGQ9H310 441 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ALG2Q9H553 416 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ZNF552Q9H707 407 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 RMND5AQ9H871 391 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ZBTB20Q9HC78 741 aaPredicted RBP9.38□□□□□ -0.91
TPM3-210ENST00000368530 SLC6A13Q9NSD5 602 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 SLC25A37Q9NYZ2 338 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 NTNG1Q9Y2I2 539 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 ABCA12Q86UK0 2595 aa9.38□□□□□ -0.91
TPM3-210ENST00000368530 A0A0G2JN53 185 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 MASP2O00187 686 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 ARPC2O15144 300 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 PRICKLE3O43900 615 aaPredicted RBP9.37□□□□□ -0.91
TPM3-210ENST00000368530 LAMP1P11279 417 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 PIM1P11309 404 aaPredicted RBP9.37□□□□□ -0.91
TPM3-210ENST00000368530 CMPK1P30085 196 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 BCL6P41182 706 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 ASMTP46597 345 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 RRADP55042 308 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 SOX8P57073 446 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 FOXL2P58012 376 aa9.37□□□□□ -0.91
TPM3-210ENST00000368530 OR4D2P58180 307 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms