RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 CBWD5Q5RIA9 395 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PRAMEF8Q5VWM4 474 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TCEAL6Q6IPX3 200 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC25A25Q6KCM7 469 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 Q6ZWC4 215 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PAGE2Q7Z2X7 111 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 EXOC3L1Q86VI1 746 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CDR2LQ86X02 465 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PRIMA1Q86XR5 153 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC36Q8IYA8 594 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CENPLQ8N0S6 344 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 IQCKQ8N0W5 287 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 MMP21Q8N119 569 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ARHGAP18Q8N392 663 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 FADS6Q8N9I5 356 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SCAIQ8N9R8 606 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 OR7G1Q8NGA0 311 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 OR9K2Q8NGE7 335 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC2A12Q8TD20 617 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 DTX3LQ8TDB6 740 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ROBO4Q8WZ75 1007 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TCEAL3Q969E4 200 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CLDN23Q96B33 292 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 OTUB2Q96DC9 234 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC41A3Q96GZ6 507 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CEP170P1Q96L14 293 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PPP1R36Q96LQ0 422 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CCDC42Q96M95 316 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 FOXN4Q96NZ1 517 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 BBS4Q96RK4 519 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 GPA33Q99795 319 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 EGFL8Q99944 293 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 MXRA8Q9BRK3 442 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 DUSP26Q9BV47 211 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 NLNQ9BYT8 704 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TMEM245Q9H330 911 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 MMP25Q9NPA2 562 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 CNGB3Q9NQW8 809 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 IL17RBQ9NRM6 502 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ELOVL2Q9NXB9 296 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 HCN3Q9P1Z3 774 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF229Q9UJW7 825 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ADAM28Q9UKQ2 775 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ENTPD4Q9Y227 616 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PLLPQ9Y342 182 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 UBE2J1Q9Y385 318 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 PCNX2A6NKB5 2137 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 NOTCH2Q04721 2471 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 TSC2P49815 1807 aa4.79□□□□□ -1.64
ECHDC1-204ENST00000368292 ASCC3Q8N3C0 2202 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ATMQ13315 3056 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ATG2BQ96BY7 2078 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 KIF26AQ9ULI4 1882 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 A0A0U1RQJ8 604 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 MEX3AA1L020 520 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 FAM149AA5PLN7 773 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 AGAP5A6NIR3 686 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 PDZK1P1A8MUH7 402 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 A8MXQ7 604 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 F5H6K3 240 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 H7C1Q1 480 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 PAPSS1O43252 624 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 STX10O60499 249 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 AVILO75366 819 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 TJP3O95049 919 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ASS1P00966 412 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 GH1P01241 217 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 MBPP02686 304 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 RLN1P04808 185 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 HMBSP08397 361 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 RPS17P08708 135 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF806P0C7X5 589 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF286BP0CG31 522 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 NR2F6P10588 404 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 CYP2D6P10635 497 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC2A3P11169 496 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 CYP4B1P13584 511 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 COX7A2P14406 83 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 TCF4P15884 667 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 EPCAMP16422 314 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ITGA2P17301 1181 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 TNNI3P19429 210 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ZNF10P21506 573 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 MMP8P22894 467 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 GIFP27352 417 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 SLC26A3P40879 764 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 RPL23AP62750 156 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 MAT1AQ00266 395 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ARHGAP1Q07960 439 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 MAPK6Q16659 721 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 TMEM41BQ5BJD5 291 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 LDLRAP1Q5SW96 308 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 CEP85LQ5SZL2 805 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 PDZK1Q5T2W1 519 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 PLCXD3Q63HM9 321 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 ACSM6Q6P461 480 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 KCTD8Q6ZWB6 473 aa4.78□□□□□ -1.64
ECHDC1-204ENST00000368292 LINC00523Q86TU6 105 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms