RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PRKNO60260 465 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 OR10H2O60403 315 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 CRCPO75575 148 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ZIC2O95409 532 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 IGKV3-11P04433 115 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 EDN3P14138 238 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 DRD2P14416 443 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 CREB1P16220 341 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 PORP16435 677 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 DEKP35659 375 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 UQCRFS1P47985 274 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 HTR6P50406 440 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SSR4P51571 173 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 HMGCS1Q01581 520 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 BTKQ06187 659 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ZNF844Q08AG5 666 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ACSM2AQ08AH3 577 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 ELOAQ14241 798 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 ZNF267Q14586 743 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 NR6A1Q15406 480 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 MAPKAPK3Q16644 382 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SPRED3Q2MJR0 410 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SPIN4Q56A73 249 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SPDYAQ5MJ70 313 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ACSM2BQ68CK6 577 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SLC48A1Q6P1K1 146 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 GALNT18Q6P9A2 607 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SCIMPQ6UWF3 145 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ZNF227Q86WZ6 799 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 ST6GALNAC3Q8NDV1 305 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 PRR7Q8TB68 274 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SREK1Q8WXA9 508 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 TMEM125Q96AQ2 219 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 C11orf24Q96F05 449 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 APIPQ96GX9 242 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 FBXL20Q96IG2 436 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 METTL2AQ96IZ6 378 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 C5orf34Q96MH7 638 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 FAIM2Q9BWQ8 316 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 LIN28AQ9H9Z2 209 aaKnown RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 RRAGDQ9NQL2 400 aaPredicted RBP9.15□□□□□ -0.94
CD48-202ENST00000368046 KLHL1Q9NR64 748 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 OLAHQ9NV23 265 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.15□□□□□ -0.94
CD48-202ENST00000368046 SLC17A7Q9P2U7 560 aa9.15□□□□□ -0.94
CD48-202ENST00000368046 SPENQ96T58 3664 aaKnown RBP9.15□□□□□ -0.95
CD48-202ENST00000368046 DOCK10Q96BY6 2186 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 PRRC2CQ9Y520 2896 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 GNG14A0A1W2PPG7 69 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 CLEC18AA5D8T8 446 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 GOLGA6L10A6NI86 522 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 KLRC4-KLRK1H3BQV0 150 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 HRKO00198 91 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 WWP2O00308 870 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 AZIN1O14977 448 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 NPHS1O60500 1241 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 ERLIN1O75477 346 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 ERAL1O75616 437 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 OR2J2O76002 312 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 ANXA4P09525 319 aaPredicted RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 CPMP14384 443 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 GSTM5P46439 218 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 HK2P52789 917 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 RAE1P78406 368 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 MRPL49Q13405 166 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 HEPACAMQ14CZ8 416 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 IMPG1Q17R60 797 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 MPEG1Q2M385 716 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 TNFAIP8L3Q5GJ75 292 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 PIGGQ5H8A4 983 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 FHL5Q5TD97 284 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 FAM219BQ5XKK7 198 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 CLEC18BQ6UXF7 455 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 LRIG3Q6UXM1 1119 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 C16orf47Q6ZP98 133 aaPredicted RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 GALNTL5Q7Z4T8 443 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 EXOC3L1Q86VI1 746 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 GPALPP1Q8IXQ4 340 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 CLYBLQ8N0X4 340 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 FAM26EQ8N5C1 309 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 SLC15A4Q8N697 577 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 FAM98AQ8NCA5 519 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 CLEC18CQ8NCF0 446 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 FAM76AQ8TAV0 307 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 NUBPLQ8TB37 319 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 NR4A3Q92570 626 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 ZIM3Q96PE6 472 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 RASL10BQ96S79 203 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 SLX1AQ9BQ83 275 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 HES7Q9BYE0 225 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 SHCBP1LQ9BZQ2 653 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 CXorf21Q9HAI6 301 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 EML4Q9HC35 981 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 SSU72Q9NP77 194 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 TNFRSF12AQ9NP84 129 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 DLGAP4Q9Y2H0 992 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 WBP11Q9Y2W2 641 aaKnown RBP9.14□□□□□ -0.95
CD48-202ENST00000368046 CCL27Q9Y4X3 112 aa9.14□□□□□ -0.95
CD48-202ENST00000368046 ZNF780BQ9Y6R6 833 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms