RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RAB42Q8N4Z0 105 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 NANOGP1Q8N7R0 232 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 TTLQ8NG68 377 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 RAB8BQ92930 207 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 TMCO6Q96DC7 493 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 SLC35G5Q96KT7 338 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 WDFY2Q96P53 400 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 TREX2Q9BQ50 279 aaPredicted RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 TSSK6Q9BXA6 273 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 ASPNQ9BXN1 380 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 HDAC8Q9BY41 377 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
CD48-201ENST00000368045 BCL2L10Q9HD36 194 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 LHX9Q9NQ69 397 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 NDUFB11Q9NX14 153 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 SLC9A8Q9Y2E8 581 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 PCDHGA4Q9Y5G9 962 aa13.54□□□□□ -0.24
CD48-201ENST00000368045 IRGMA1A4Y4 181 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 C1QTNF3-AMACRE9PGA6 284 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 ZNF670-ZNF695F2Z2N8 137 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 FAM227AF5H4B4 570 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 DYRK3O43781 588 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 TMPRSS11DO60235 418 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 SEMA7AO75326 666 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 CLEC3AO75596 197 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 NFATC1O95644 943 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 KHKP50053 298 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 RORCP51449 518 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 TMEM35AQ53FP2 167 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 DESI1Q6ICB0 168 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 TMEM64Q6YI46 380 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 GDPD3Q7L5L3 318 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 C2orf73Q8N5S3 287 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 NR4A3Q92570 626 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 EXOSC8Q96B26 276 aaKnown RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 CNPPD1Q9BV87 410 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 FAIM2Q9BWQ8 316 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 CUEDC1Q9NWM3 386 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 DNAJC27Q9NZQ0 273 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 DEC1Q9P2X7 70 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 HCN2Q9UL51 889 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 A4GNTQ9UNA3 340 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 DIMT1Q9UNQ2 313 aaKnown RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 TMEM98Q9Y2Y6 226 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 HYKKA2RU49 373 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 SLC35F4A4IF30 521 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 NME6O75414 186 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 SOX14O95416 240 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 ACADMP11310 421 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 SPNP16150 400 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 GSTM3P21266 225 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 PCYT1AP49585 367 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
CD48-201ENST00000368045 TP53BP2Q13625 1128 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 KCNJ8Q15842 424 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 PRAMEF8Q5VWM4 474 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 FAM46CQ5VWP2 391 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 PRAMEF7Q5VXH5 474 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 CCBE1Q6UXH8 406 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 OR4D11Q8NGI4 311 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 VANGL1Q8TAA9 524 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 SLC7A13Q8TCU3 470 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 SFXN5Q8TD22 340 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 ING5Q8WYH8 240 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 LRRC3BQ96PB8 259 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 RSPO3Q9BXY4 272 aaPredicted RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 SERHL2Q9H4I8 314 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 EXOSC4Q9NPD3 245 aaKnown RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 SLC23A2Q9UGH3 650 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 SSR3Q9UNL2 185 aa13.53□□□□□ -0.24
CD48-201ENST00000368045 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
CD48-201ENST00000368045 A0A0A6YYD5 115 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 A0A1W2PPV9 198 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 MYL12BO14950 172 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 TPST2O60704 377 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 DNTTP04053 509 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 TP53P04637 393 aaPredicted RBP13.52□□□□□ -0.25
CD48-201ENST00000368045 SLC35G4P0C7Q5 338 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 NR2F1P10589 423 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 NTSP30990 170 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 TNFSF8P32971 234 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 BMPR1AP36894 532 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 CASP3P42574 277 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 CRYBB2P43320 205 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 OR4C11Q6IEV9 310 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 PODNL1Q6PEZ8 512 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 BHLHB9Q6PI77 547 aa13.52□□□□□ -0.25
CD48-201ENST00000368045 UBE3DQ7Z6J8 389 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms