RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 DEKP35659 375 aaKnown RBP22.18■■□□□ 1.14
PFDN2-201ENST00000368010 XKP51811 444 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 ALDH6A1Q02252 535 aaKnown RBP22.18■■□□□ 1.14
PFDN2-201ENST00000368010 ACSM2AQ08AH3 577 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 PCLAFQ15004 111 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 ACSM2BQ68CK6 577 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 SLC48A1Q6P1K1 146 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 SCIMPQ6UWF3 145 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 RNF111Q6ZNA4 994 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 C10orf107Q8IVU9 208 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 GALNT12Q8IXK2 581 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 C9orf40Q8IXQ3 194 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 DOK4Q8TEW6 326 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 SMC6Q96SB8 1091 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 TMEM109Q9BVC6 243 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 ERRFI1Q9UJM3 462 aaPredicted RBP22.18■■□□□ 1.14
PFDN2-201ENST00000368010 RAB21Q9UL25 225 aa22.18■■□□□ 1.14
PFDN2-201ENST00000368010 FLNBO75369 2602 aaKnown RBP22.18■■□□□ 1.14
PFDN2-201ENST00000368010 A0A1W2PS29 197 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 SERTM1A2A2V5 107 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 GOLGA6L10A6NI86 522 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 PCDH7O60245 1069 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 TUBBP07437 444 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 CPMP14384 443 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 SOX3P41225 446 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 KCNK10P57789 538 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 ASPHQ12797 758 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 MPEG1Q2M385 716 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 C6orf163Q5TEZ5 329 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 OPN5Q6U736 354 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 IL20RBQ6UXL0 311 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 SLC29A4Q7RTT9 530 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 MDGA2Q7Z553 956 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 POGLUT1Q8NBL1 392 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 APIPQ96GX9 242 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 FAM111AQ96PZ2 611 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 CXorf21Q9HAI6 301 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 PSME2Q9UL46 239 aa22.17■■□□□ 1.14
PFDN2-201ENST00000368010 GNG14A0A1W2PPG7 69 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 OR6C76A6NM76 312 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 KLRC4-KLRK1H3BQV0 150 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 TRIM13O60858 407 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 ZNF24P17028 368 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 NT5EP21589 574 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 ALDH9A1P49189 494 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 IMPG1Q17R60 797 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 SPDYAQ5MJ70 313 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 MMP21Q8N119 569 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 CPSF7Q8N684 471 aaKnown RBP22.16■■□□□ 1.14
PFDN2-201ENST00000368010 SLC22A8Q8TCC7 542 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 GAL3ST4Q96RP7 486 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 TRMOQ9BU70 441 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 GATA5Q9BWX5 397 aaPredicted RBP22.16■■□□□ 1.14
PFDN2-201ENST00000368010 CES1P1Q9UKY3 287 aa22.16■■□□□ 1.14
PFDN2-201ENST00000368010 USP9XQ93008 2570 aaPredicted RBP22.15■■□□□ 1.14
PFDN2-201ENST00000368010 SPAG7O75391 227 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 ERAL1O75616 437 aaKnown RBP22.15■■□□□ 1.14
PFDN2-201ENST00000368010 PORP16435 677 aaPredicted RBP22.15■■□□□ 1.14
PFDN2-201ENST00000368010 SERPINB3P29508 390 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 TIA1P31483 386 aaKnown RBP eCLIP22.15■■□□□ 1.144e-8■■■■□ 19.4
PFDN2-201ENST00000368010 MEOX1P50221 254 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 SLC37A1P57057 533 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 RAE1P78406 368 aaKnown RBP22.15■■□□□ 1.14
PFDN2-201ENST00000368010 BTKQ06187 659 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 RBPJQ06330 500 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 KRT71Q3SY84 523 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 C4orf17Q53FE4 359 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 GALNT18Q6P9A2 607 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 RTL4Q6ZR62 310 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 SULF2Q8IWU5 870 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 PSD4Q8NDX1 1056 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 KLHL29Q96CT2 875 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 GPR137Q96N19 417 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 SHCBP1LQ9BZQ2 653 aa22.15■■□□□ 1.14
PFDN2-201ENST00000368010 POLEQ07864 2286 aa22.14■■□□□ 1.14
PFDN2-201ENST00000368010 NPIPA5E9PKD4 350 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 PEX1O43933 1283 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 IL3P08700 152 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 STSP08842 583 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 UROSP10746 265 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 CSNK2A2P19784 350 aaPredicted RBP22.14■■□□□ 1.13
PFDN2-201ENST00000368010 EBPQ15125 230 aaKnown RBP22.14■■□□□ 1.13
PFDN2-201ENST00000368010 ZNF750Q32MQ0 723 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 KRTCAP3Q53RY4 240 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 PIGGQ5H8A4 983 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 TRIM46Q7Z4K8 759 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 TCP10LQ8TDR4 215 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 SGCZQ96LD1 299 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 WWTR1Q9GZV5 400 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 TSPAN10Q9H1Z9 355 aaPredicted RBP22.14■■□□□ 1.13
PFDN2-201ENST00000368010 TNFRSF12AQ9NP84 129 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 RRAGDQ9NQL2 400 aaPredicted RBP22.14■■□□□ 1.13
PFDN2-201ENST00000368010 RYDENQ9NUL5 291 aaKnown RBP22.14■■□□□ 1.13
PFDN2-201ENST00000368010 SIRT5Q9NXA8 310 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 SENP1Q9P0U3 644 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 SLC17A7Q9P2U7 560 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 NPIPA1Q9UND3 350 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 DLGAP4Q9Y2H0 992 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 ZNF780BQ9Y6R6 833 aa22.14■■□□□ 1.13
PFDN2-201ENST00000368010 DOPEY2Q9Y3R5 2298 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms