RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CITED4Q96RK1 184 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 DUSP16Q9BY84 665 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM117Q9H0C3 514 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ASB8Q9H765 288 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SPACA1Q9HBV2 294 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SLC17A7Q9P2U7 560 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 PCDHGC4Q9Y5F7 938 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TYMPP19971 482 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CCND3P30281 292 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 IL5RAQ01344 420 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CTBSQ01459 385 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FOXO1Q12778 655 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZACNQ401N2 412 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RTP2Q5QGT7 225 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CIB1Q99828 191 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 P2RY13Q9BPV8 354 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 LNP1A1A4G5 178 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 KLF10Q13118 480 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 APOFQ13790 326 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 C4orf17Q53FE4 359 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 WNT9AO14904 365 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 FABP7O15540 132 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IL33O95760 270 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CSF2P04141 144 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC6A6P31641 620 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PMVKQ15126 192 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GCNT6Q5T4J0 391 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 LCLAT1Q6UWP7 414 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR2L5Q8NG80 312 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 UBTD2Q8WUN7 234 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PNPLA2Q96AD5 504 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PTERQ96BW5 349 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RPUSD4Q96CM3 377 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLITRK3O94933 977 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC17A1Q14916 467 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TOMM34Q15785 309 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 VWA2Q5GFL6 755 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 FAM209AQ5JX71 171 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GLT8D1Q68CQ7 371 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OTOP3Q7RTS5 596 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MCEMP1Q8IX19 187 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CBR4Q8N4T8 237 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR2T33Q8NG76 320 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 BTN2A3PQ96KV6 586 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 IL26Q9NPH9 171 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DNMT3AQ9Y6K1 912 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 EIF2AK2P19525 551 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 C14orf28Q4W4Y0 310 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 AFMIDQ63HM1 303 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SORCS1Q8WY21 1168 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF285Q96NJ3 590 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DNAJC18Q9H819 358 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ACTR10Q9NZ32 417 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SPEF2Q9C093 1822 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR6C75A6NL08 312 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NEDD8-MDP1E9PL57 170 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PYDC2Q56P42 97 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MAP1SQ66K74 1059 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TWIST2Q8WVJ9 160 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 HACL1Q9UJ83 578 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RFPL3O75679 317 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CYP2A6P11509 494 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 BSGP35613 385 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SYTL3Q4VX76 610 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CNKSR3Q6P9H4 555 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DEGS2Q6QHC5 323 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NPNTQ6UXI9 565 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 UBR7Q8N806 425 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR52N1Q8NH53 320 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DDX1Q92499 740 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZBTB45Q96K62 511 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MIEF1Q9NQG6 463 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 FAM118AQ9NWS6 357 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF69Q9UC07 566 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 Q9Y3F1 56 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CDK1P06493 297 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PPM1JQ5JR12 505 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 NADSYN1Q6IA69 706 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 OR13C3Q8NGS6 347 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 CNOT9Q92600 299 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PTX4Q96A99 478 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM159Q96B96 161 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SLC41A2Q96JW4 573 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 PIP5K1AQ99755 562 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 RAMP2O60895 175 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GADD45AP24522 165 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DGKEP52429 567 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF267Q14586 743 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MPPE1Q53F39 396 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 SFXN5Q8TD22 340 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GNPNAT1Q96EK6 184 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GABARAPL1Q9H0R8 117 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 DBNDD1Q9H9R9 158 aa3.6□□□□□ -1.83
SYNE1-207ENST00000367255 MRPS30Q9NP92 439 aaKnown RBP3.6□□□□□ -1.83
SYNE1-207ENST00000367255 GP1BAP07359 652 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms