RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CRCPO75575 148 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 GP1BBP13224 206 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 LHCGRP22888 699 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 PIK3R1P27986 724 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 SSTR1P30872 391 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCR2P41597 374 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 CASP3P42574 277 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 RPS9P46781 194 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 OR3A1P47881 315 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 NME5P56597 212 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 SRSF5Q13243 272 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 EMC2Q15006 297 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 RBBP5Q15291 538 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZRSR1Q15695 479 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 C2orf76Q3KRA6 126 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 GPR33Q49SQ1 333 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 TTC27Q6P3X3 843 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 MARK2Q7KZI7 788 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 TRPT1Q86TN4 253 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ANKRD46Q86W74 232 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 CROCCP3Q8IVE0 287 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 AQP12AQ8IXF9 295 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 STPG4Q8N801 248 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 KIAA0895Q8NCT3 520 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 OR13C3Q8NGS6 347 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ING5Q8WYH8 240 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 TCEAL4Q96EI5 215 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 PDLIM5Q96HC4 596 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 SENP5Q96HI0 755 aaPredicted RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 CEP170P1Q96L14 293 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 HSD17B14Q9BPX1 270 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 LXNQ9BS40 222 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 MTMR12Q9C0I1 747 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 MID1IP1Q9NPA3 183 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 NOCTQ9UK39 431 aaKnown RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 NAP1L2Q9ULW6 460 aaPredicted RBP5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 KCNJ14Q9UNX9 436 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 PCDHGA1Q9Y5H4 931 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 ASPMQ8IZT6 3477 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
RNU4-39P-201ENST00000362455 A0A0A6YYC8 382 aaPredicted RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 IGHV4-61A0A0C4DH41 118 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 I3L1I5 382 aaPredicted RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 I3L4J1 428 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 KCNAB3O43448 404 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 KRT36O76013 467 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 DFFBO76075 338 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 GLCEO94923 617 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 SEC24AO95486 1093 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 CAVIN2O95810 425 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 NGFP01138 241 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 IGHV4-59P01825 116 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 DLATP10515 647 aaKnown RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 F3P13726 295 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 CEBPBP17676 345 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 ALDH4A1P30038 563 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 HOXA9P31269 272 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 YWHABP31946 246 aaKnown RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 OR1D2P34982 312 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 IER3P46695 156 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 DLX5P56178 289 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 LASP1Q14847 261 aaKnown RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 P2RY6Q15077 328 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 PSMD5Q16401 504 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 FUT11Q495W5 492 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 FAM78AQ5JUQ0 283 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 KIAA1161Q6NSJ0 714 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 SLC26A9Q7LBE3 791 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 PIGZQ86VD9 579 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 BLIDQ8IZY5 108 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 CNNM3Q8NE01 707 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 CCDC12Q8WUD4 166 aaPredicted RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 C4orf45Q96LM5 186 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 ACAT2Q9BWD1 397 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 SIX2Q9NPC8 291 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 FASNP49327 2511 aaKnown RBP5□□□□□ -1.61
RNU4-39P-201ENST00000362455 IGF2RP11717 2491 aa5□□□□□ -1.61
RNU4-39P-201ENST00000362455 F5P12259 2224 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 A0A0B4J203 849 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 C13orf42A0A1B0GVH6 325 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 FAM172BPA6NC97 362 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 BMPR1BO00238 502 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 FPGTO14772 594 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 ECI2O75521 394 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 LYPLA2O95372 231 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 CYP2A7P20853 494 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 AXLP30530 894 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 DUTP33316 252 aaKnown RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 SERPINB6P35237 376 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 SFTPDP35247 375 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 HERV-K104P61576 105 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 RPL36AP83881 106 aaKnown RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 RPA4Q13156 261 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 OPCMLQ14982 345 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 FAM76BQ5HYJ3 339 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 PPM1LQ5SGD2 360 aa4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 N4BP2L1Q5TBK1 243 aaPredicted RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 ZNF770Q6IQ21 691 aaPredicted RBP4.99□□□□□ -1.61
RNU4-39P-201ENST00000362455 UGT3A1Q6NUS8 523 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms