RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ATP4BP51164 291 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 EEF1A2Q05639 463 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 MLC1Q15049 377 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 RPS6KA2Q15349 733 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 DEFB109BQ30KR1 87 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 CPTPQ5TA50 214 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 ATP1A1-AS1Q5TC04 95 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 C6orf163Q5TEZ5 329 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 KBTBD2Q8IY47 623 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 MMP21Q8N119 569 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 ZNF675Q8TD23 568 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 RIT1Q92963 219 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 UCN3Q969E3 161 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 COQ8BQ96D53 544 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 CNRIP1Q96F85 164 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 ZBED6CLQ96FA7 236 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 BBS4Q96RK4 519 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 BHLHE41Q9C0J9 482 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 DCTN4Q9UJW0 460 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 ZZEF1O43149 2961 aa12.92□□□□□ -0.34
NSMCE1-201ENST00000361439 WASHC1A8K0Z3 465 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 PDPK1O15530 556 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 AKAP10O43572 662 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 CEACAM4O75871 244 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 LRATO95237 230 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 TNNI3P19429 210 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 GPR143P51810 404 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ARFIP2P53365 341 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 SLC26A5P58743 744 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 STX1BP61266 288 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 GNGT1P63211 74 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 RHDQ02161 417 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ID2Q02363 134 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 LRRC74AQ0VAA2 488 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 MAP4K2Q12851 820 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 IRAK1BP1Q5VVH5 260 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 CGB2Q6NT52 195 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 GALNT12Q8IXK2 581 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 MIER2Q8N344 545 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 NFAM1Q8NET5 270 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 OR7G1Q8NGA0 311 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 OR8K3Q8NH51 312 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 CLHC1Q8NHS4 586 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 RFWD2Q8NHY2 731 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ZFP28Q8NHY6 868 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ELP5Q8TE02 316 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 GFM2Q969S9 779 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 VMP1Q96GC9 406 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 FBXL20Q96IG2 436 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 RILPQ96NA2 401 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 LHPPQ9H008 270 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 CLMPQ9H6B4 373 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 CXorf21Q9HAI6 301 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 ZNF160Q9HCG1 818 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 SH3BP4Q9P0V3 963 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 C5AR2Q9P296 337 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 COPS7AQ9UBW8 275 aa12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 G3BP2Q9UN86 482 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 DSPP15924 2871 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-201ENST00000361439 IGHV3-20A0A0C4DH32 117 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 E9PBE3 544 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 SLC22A3O75751 556 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 BCAS2O75934 225 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 IGKV3-11P04433 115 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 IL6P05231 212 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 CLCN2P51788 898 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 GYS2P54840 703 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 FUT7Q11130 342 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 BTBD16Q32M84 506 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 ANXA8L1Q5VT79 327 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 GALNT16Q8N428 558 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 APCDD1LQ8NCL9 501 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 OR1N1Q8NGS0 311 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 SUN3Q8TAQ9 357 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 SLC2A12Q8TD20 617 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 CTHRC1Q96CG8 243 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 SENP5Q96HI0 755 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 AMDHD1Q96NU7 426 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 MESP1Q9BRJ9 268 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 TMEM120AQ9BXJ8 343 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 TUBD1Q9UJT1 453 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 ADAM21Q9UKJ8 722 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 PCDHGB7Q9Y5F8 929 aa12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 PCDHGA9Q9Y5G4 932 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-201ENST00000361439 A0A087WV62 115 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 DYTNA2CJ06 578 aa12.89□□□□□ -0.35
NSMCE1-201ENST00000361439 OR6C76A6NM76 312 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms