RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FAM180BQ6P0A1 224 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 ST13P4Q8IZP2 240 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF248Q8NDW4 579 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 SUN3Q8TAQ9 357 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 CIDECQ96AQ7 238 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 KIAA1143Q96AT1 154 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 NACC2Q96BF6 587 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 EFHD1Q9BUP0 239 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 GPN2Q9H9Y4 310 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 SLAMF7Q9NQ25 335 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 ACSS1Q9NUB1 689 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 GIMAP4Q9NUV9 329 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 ARMCX1Q9P291 453 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 CAPN7Q9Y6W3 813 aa11.62□□□□□ -0.55
NIF3L1-201ENST00000359683 DSPP15924 2871 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 LOC102723996A0A087X1L8 192 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 MYOCOSA0A1B0GUC4 107 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 PRSS51A0A1B0GVH4 220 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 DYTNA2CJ06 578 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 CAPN14A8MX76 684 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 PDPK1O15530 556 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 LIFP15018 202 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 MMP11P24347 488 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 GALNSP34059 522 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 MPIP34949 423 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 STT3AP46977 705 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 KCNK10P57789 538 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 MLC1Q15049 377 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 ANXA8L1Q5VT79 327 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 OR4F3Q6IEY1 312 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 MSANTD1Q6ZTZ1 278 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 ANKRD37Q7Z713 158 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 FITM2Q8N6M3 262 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 METTL21AQ8WXB1 218 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 SPDL1Q96EA4 605 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 RBM18Q96H35 190 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 AMDHD1Q96NU7 426 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 BBS4Q96RK4 519 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 PELOQ9BRX2 385 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 GLIPR2Q9H4G4 154 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 FAM120CQ9NX05 1096 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 ENTPD4Q9Y227 616 aa11.61□□□□□ -0.55
NIF3L1-201ENST00000359683 A0A1W2PP18 115 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 A0A1W2PQ72 361 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 A0A1W2PRB8 838 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 RNASET2O00584 256 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CFLARO15519 480 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CREG1O75629 220 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ATP1B1P05026 303 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 SNRPB2P08579 225 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CAPN3P20807 821 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 NTSP30990 170 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 TLR1Q15399 786 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 VPS26BQ4G0F5 336 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 FAAH2Q6GMR7 532 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 LRRC25Q8N386 305 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 VPS37AQ8NEZ2 397 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 KCNE4Q8WWG9 221 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 VPS33AQ96AX1 596 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 PPWD1Q96BP3 646 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ZBED6CLQ96FA7 236 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 DPH1Q9BZG8 443 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 BTNL2Q9UIR0 455 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 HS3ST3B1Q9Y662 390 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CCDC154A6NI56 674 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 NR5A2O00482 541 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 NCBP2P52298 156 aaKnown RBP eCLIP11.6□□□□□ -0.553e-10■■□□□ 11.4
NIF3L1-201ENST00000359683 MANFP55145 182 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 OR4D2P58180 307 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 PLIN5Q00G26 463 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 LRRC74AQ0VAA2 488 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 MGAT2Q10469 447 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 MAPRE2Q15555 327 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ELAVL1Q15717 326 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 KIRREL2Q6UWL6 708 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 DGAT2L6Q6ZPD8 337 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 PPP1R32Q7Z5V6 425 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 VASH2Q86V25 355 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ZFP28Q8NHY6 868 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 RP9Q8TA86 221 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 PSMA8Q8TAA3 256 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ADAMTS17Q8TE56 1095 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 OR5P2Q8WZ92 322 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ERP27Q96DN0 273 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CCDC115Q96NT0 180 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 DGAT2Q96PD7 388 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 MESP1Q9BRJ9 268 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 SLC25A23Q9BV35 468 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 CXorf21Q9HAI6 301 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ADAP2Q9NPF8 381 aa11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 C19orf25Q9UFG5 118 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-201ENST00000359683 ERVK-11Q9UQG0 969 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms