RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 DCLRE1CQ96SD1 692 aaKnown RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 POLDIP3Q9BY77 421 aaKnown RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 NLNQ9BYT8 704 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 B3GAT2Q9NPZ5 323 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 SEMA3GQ9NS98 782 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 CD84Q9UIB8 345 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 ADAM30Q9UKF2 790 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 TEX51A0A1B0GUA7 166 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 PRR23AA6NEV1 266 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 RFPL3O75679 317 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 BCHEP06276 602 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 PTBP1P26599 531 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 GABRA5P31644 462 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 CSNK1DP48730 415 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 SMAD3P84022 425 aaKnown RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 PTSQ03393 145 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 CDONQ4KMG0 1287 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZBTB37Q5TC79 503 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 PGBD2Q6P3X8 592 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 FUT10Q6P4F1 479 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 MZT2AQ6P582 158 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 PRSS55Q6UWB4 352 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZNF782Q6ZMW2 699 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 CREB3L1Q96BA8 519 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 SCRN2Q96FV2 425 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 KLF16Q9BXK1 252 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 NUP50Q9UKX7 468 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 ING4Q9UNL4 249 aa9.44□□□□□ -0.9
TRAPPC2-201ENST00000359680 IRGMA1A4Y4 181 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PIPSLA2A3N6 862 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SAP18O00422 153 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PITPNM1O00562 1244 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 NME6O75414 186 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PSIP1O75475 530 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 APOL3O95236 402 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 CATP04040 527 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TUFMP49411 452 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 EVX1P49640 407 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ATN1P54259 1190 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SMIM11AP58511 58 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TAS2R50P59544 299 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 FABP5Q01469 135 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 UBE3AQ05086 875 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TSTA3Q13630 321 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TPBGQ13641 420 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 GINS1Q14691 196 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 MPEG1Q2M385 716 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TRIM71Q2Q1W2 868 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZNF284Q2VY69 593 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 FLYWCH1Q4VC44 716 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SYTL3Q4VX76 610 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZDHHC20Q5W0Z9 365 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TCTN3Q6NUS6 607 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PLA2G15Q8NCC3 412 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 C16orf78Q8WTQ4 265 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 MARVELD3Q96A59 401 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ZNF582Q96NG8 517 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SOSTQ9BQB4 213 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 WACQ9BTA9 647 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SYNDIG1Q9H7V2 258 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 GLTPQ9NZD2 209 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TESQ9UGI8 421 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 STOML2Q9UJZ1 356 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SF3B6Q9Y3B4 125 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 KCNE2Q9Y6J6 123 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 FRMPD3Q5JV73 1810 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TMEM129A0AVI4 362 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SNTNA6NMZ2 147 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SGK494L7N484 410 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TEX28O15482 410 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PDPK1O15530 556 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 LRRTM2O43300 516 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SGTAO43765 313 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PLOD3O60568 738 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 POLR2CP19387 275 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 LHCGRP22888 699 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 FGF9P31371 208 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 AVPR1BP47901 424 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PNLIPRP1P54315 467 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ADAM15Q13444 863 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PDE7AQ13946 482 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 SNAPC1Q16533 368 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 CCNJQ5T5M9 372 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TNFAIP8L2Q6P589 184 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 OR8H3Q8N146 312 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 LRRC17Q8N6Y2 441 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 OR2AP1Q8NGE2 309 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.43□□□□□ -0.91e-8■■■■■ 34.8
TRAPPC2-201ENST00000359680 APOBEC4Q8WW27 367 aaKnown RBP9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 HDHD2Q9H0R4 259 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 FOLH1BQ9HBA9 442 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 MIEF1Q9NQG6 463 aa9.43□□□□□ -0.9
TRAPPC2-201ENST00000359680 TAS2R7Q9NYW3 318 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 687.1 ms