RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SH3PXD2BA1X283 911 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 GPR4P46093 362 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 CRYZQ08257 329 aaKnown RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ATAD3CQ5T2N8 411 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ZDHHC14Q8IZN3 488 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 OR52P1PQ8NH57 321 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 SCAMP4Q969E2 229 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 hCG_1807616A0A1W2PRN6 198 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 H2AFB2P0C5Z0 115 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 HOXD8P13378 290 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 CLCA4Q14CN2 919 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 MLC1Q15049 377 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 COL28A1Q2UY09 1125 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF829Q3KNS6 432 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TRAM1L1Q8N609 369 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 KCNJ9Q92806 393 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TSACCQ96A04 125 aaPredicted RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF382Q96SR6 550 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 SRYQ05066 204 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 PIGGQ5H8A4 983 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 HDAC2Q92769 488 aaKnown RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 C12orf42Q96LP6 360 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 PHLPP1O60346 1717 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TRBV2A0A0J9YWF9 115 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TMEM151AQ8N4L1 468 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 OR8J3Q8NGG0 315 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 TRMT10AQ8TBZ6 339 aaKnown RBP17.6■□□□□ 0.41
SHANK1-202ENST00000359082 KLHL21Q9UJP4 597 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 ACSL6Q9UKU0 697 aa17.6■□□□□ 0.41
SHANK1-202ENST00000359082 F5H0A9 414 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-202ENST00000359082 PCDH17O14917 1159 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 RASAL1O95294 804 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 TBPL1P62380 186 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 MOCOSQ96EN8 888 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 MSANTD3Q96H12 275 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 IL17FQ96PD4 163 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 SYT4Q9H2B2 425 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 TOXO94900 526 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 IRF2P14316 349 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 LRRC25Q8N386 305 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-202ENST00000359082 Q8N402 240 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 GGT2P36268 569 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 GPR143P51810 404 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF45Q02386 682 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 MALLQ13021 153 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 CES4AQ5XG92 561 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 TREML1Q86YW5 311 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 DEFB126Q9BYW3 111 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 FAM72CH0Y354 149 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 MPC1LP0DKB6 136 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 ERP29P30040 261 aaKnown RBP17.59■□□□□ 0.41
SHANK1-202ENST00000359082 CTBP2P56545 445 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 DEFB134Q4QY38 66 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 C6orf136Q5SQH8 315 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 FAM72AQ5TYM5 149 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 ATG9BQ674R7 924 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 FAM72DQ6L9T8 149 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 FAM72BQ86X60 149 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 PEX13Q92968 403 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 NPY6RQ99463 290 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 GJD2Q9UKL4 321 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 VEGFDO43915 354 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 POU3F4P49335 361 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 ZFP41Q8N8Y5 198 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 RDH12Q96NR8 316 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 TP63Q9H3D4 680 aaPredicted RBP17.59■□□□□ 0.41
SHANK1-202ENST00000359082 EMC3Q9P0I2 261 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 Q9Y3F1 56 aa17.59■□□□□ 0.41
SHANK1-202ENST00000359082 TIA1P31483 386 aaKnown RBP eCLIP17.58■□□□□ 0.41
SHANK1-202ENST00000359082 DLX2Q07687 328 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF542PQ5EBM4 170 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 FIGNL1Q6PIW4 674 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 ELMOD2Q8IZ81 293 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 ZNF442Q9H7R0 627 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 SPHK2Q9NRA0 654 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 LEPRP48357 1165 aaKnown RBP17.58■□□□□ 0.41
SHANK1-202ENST00000359082 OR4C11Q6IEV9 310 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 CFAP77Q6ZQR2 320 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 ZFAND4Q86XD8 727 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 F2RL3Q96RI0 385 aa17.58■□□□□ 0.41
SHANK1-202ENST00000359082 NAA11Q9BSU3 229 aaPredicted RBP17.58■□□□□ 0.41
SHANK1-202ENST00000359082 SEC14L5O43304 696 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ACTC1P68032 377 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ACTA1P68133 377 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 GBX1Q14549 363 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 TRAPPC6BQ86SZ2 158 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF461Q8TAF7 563 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF317Q96PQ6 595 aaPredicted RBP17.58■□□□□ 0.4
SHANK1-202ENST00000359082 GPR174Q9BXC1 333 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 RFC2P35250 354 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 RIDAP52758 137 aaKnown RBP17.58■□□□□ 0.4
SHANK1-202ENST00000359082 KCNK12Q9HB15 430 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 COPZ2Q9P299 210 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 H7C2Y5 167 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ATE1O95260 518 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF181Q2M3W8 571 aa17.58■□□□□ 0.4
SHANK1-202ENST00000359082 HOXB13Q92826 284 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms