RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
NFIX-201ENST00000358552 DUX1O43812 170 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 DNAJB5O75953 348 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 PRKD3O94806 890 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 AIFM1O95831 613 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 FHP07954 510 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 ARAFP10398 606 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 ITGA2P17301 1181 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 MAGEA2P43356 314 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 MVDP53602 400 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 CDK6Q00534 326 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 TOP3AQ13472 1001 aaPredicted RBP12.55□□□□□ -0.4
NFIX-201ENST00000358552 TP53BP2Q13625 1128 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 TUBA3CQ13748 450 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 DEFB133Q30KQ1 61 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 CRB2Q5IJ48 1285 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.55□□□□□ -0.4
NFIX-201ENST00000358552 PEAR1Q5VY43 1037 aaPredicted RBP12.55□□□□□ -0.4
NFIX-201ENST00000358552 REEP3Q6NUK4 255 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 USP53Q70EK8 1073 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 ZC3H7AQ8IWR0 971 aaKnown RBP12.55□□□□□ -0.4
NFIX-201ENST00000358552 DNAJC22Q8N4W6 341 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 FBXO30Q8TB52 745 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 ZNF285Q96NJ3 590 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 DOHHQ9BU89 302 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 SPATA5L1Q9BVQ7 753 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 GLIPR2Q9H4G4 154 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 A4GALTQ9NPC4 353 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 LRIT1Q9P2V4 623 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 PILRBQ9UKJ0 227 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 OAZ3Q9UMX2 235 aa12.55□□□□□ -0.4
NFIX-201ENST00000358552 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
NFIX-201ENST00000358552 A0A1B0GVT2 93 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SYNDIG1LA6NDD5 238 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 EMC8O43402 210 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ASNA1O43681 348 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 GALR3O60755 368 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 CST1P01037 141 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 MSL3P1P0C860 447 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 HOXB3P14651 431 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 ST6GAL1P15907 406 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 LSSP48449 732 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 LIM2P55344 173 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SELENOWP63302 87 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SCARB2Q14108 478 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 RBM48Q5RL73 367 aaKnown RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 RNF130Q86XS8 419 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZDHHC13Q8IUH4 622 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 CYGBQ8WWM9 190 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZNF607Q96SK3 696 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 PLGRKTQ9HBL7 147 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 KCMF1Q9P0J7 381 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SEMA5BQ9P283 1151 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 IFT80Q9P2H3 777 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 USP22Q9UPT9 525 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SNRNP200O75643 2136 aaKnown RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZNF318Q5VUA4 2279 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 CABIN1Q9Y6J0 2220 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ERAL1O75616 437 aaKnown RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 SERPINB7O75635 380 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 B3GALT4O96024 378 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 EIF2S1P05198 315 aaKnown RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 AVPR2P30518 371 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SLC5A2P31639 672 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 KHKP50053 298 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 HLCSP50747 726 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ALDH3A2P51648 485 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 HPCAP84074 193 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 HSPB3Q12988 150 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 SQSTM1Q13501 440 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 PRTGQ2VWP7 1150 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 FAM214AQ32MH5 1076 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 RFX4Q33E94 735 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZNF528Q3MIS6 628 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 PLK5Q496M5 336 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 DEFB134Q4QY38 66 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 YOD1Q5VVQ6 348 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZCCHC12Q6PEW1 402 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZNF551Q7Z340 670 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 HIPK1Q86Z02 1210 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 LRRC25Q8N386 305 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 AMER3Q8N944 861 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
NFIX-201ENST00000358552 B4GALNT2Q8NHY0 566 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 ZNF347Q96SE7 839 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 GPATCH2Q9NW75 528 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 CALML5Q9NZT1 146 aa12.54□□□□□ -0.4
NFIX-201ENST00000358552 NTMQ9P121 344 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms