RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 QRFPRQ96P65 431 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 DPEP2Q9H4A9 486 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 ANKRA2Q9H9E1 313 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 PLEKHB1Q9UF11 243 aaPredicted RBP16.8■□□□□ 0.28
RTN4-204ENST00000357732 SH2B3Q9UQQ2 575 aa16.8■□□□□ 0.28
RTN4-204ENST00000357732 A0A1W2PRU2 124 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 FAM227AF5H4B4 570 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 PDPK1O15530 556 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 SOX14O95416 240 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 MYCP01106 439 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 ELFN1P0C7U0 828 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 NNMTP40261 264 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 VASPP50552 380 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 WNT4P56705 351 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 RAB40BQ12829 278 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 TARDBPQ13148 414 aaKnown RBP eCLIP16.79■□□□□ 0.283e-9■■■■■ 47
RTN4-204ENST00000357732 TPBGQ13641 420 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 MLC1Q15049 377 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 NANOGNBQ7Z5D8 188 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 NOXA1Q86UR1 476 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 LAPTM4BQ86VI4 370 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 OR52I1Q8NGK6 324 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 RNF170Q96K19 258 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 LINC00615Q96LM1 132 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 COQ7Q99807 217 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 MIXL1Q9H2W2 232 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 RHBGQ9H310 441 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 ABCB9Q9NP78 766 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 FGF20Q9NP95 211 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 ZSCAN32Q9NX65 697 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 POLR1CO15160 346 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 PROM1O43490 865 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 SEMA7AO75326 666 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 TP53P04637 393 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 CSF3P09919 207 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 GSTM3P21266 225 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 FGF9P31371 208 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 FEN1P39748 380 aaKnown RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 MANFP55145 182 aaKnown RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 EFNB1P98172 346 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 LIPIQ6XZB0 460 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 KIAA0907Q7Z7F0 614 aaPredicted RBP16.79■□□□□ 0.28
RTN4-204ENST00000357732 PLA2G15Q8NCC3 412 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 DIRAS2Q96HU8 199 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 RNF121Q9H920 327 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 MARCH7Q9H992 704 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 TIGARQ9NQ88 270 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 IL36AQ9UHA7 158 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 GSTK1Q9Y2Q3 226 aa16.79■□□□□ 0.28
RTN4-204ENST00000357732 A0A1W2PQL4 384 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 B4DXG7 233 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 AP3D1O14617 1153 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SLC30A4O14863 429 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 TMCC2O75069 709 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 NME6O75414 186 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 LRG1P02750 347 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 MSL3P1P0C860 447 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 CPN2P22792 545 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 MYL9P24844 172 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 CA8P35219 290 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 PPP3R1P63098 170 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 CHRNEQ04844 493 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 HNRNPA0Q13151 305 aaKnown RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 SYT14P1Q58G82 188 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 RPS26P11Q5JNZ5 115 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 PRAMEF14Q5SWL7 426 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 PRAMEF13Q5VWM6 474 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 PPP2R2DQ66LE6 453 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 FAM129CQ86XR2 697 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 TCTE3Q8IZS6 198 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SLC7A13Q8TCU3 470 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SMPDL3AQ92484 453 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 TMEM246Q9BRR3 403 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SPATA5L1Q9BVQ7 753 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 ACSS1Q9NUB1 689 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 P2RX2Q9UBL9 471 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SEC14L3Q9UDX4 400 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 KLHL21Q9UJP4 597 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 ANKDD1BA6NHY2 528 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 LILRB5O75023 590 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 TSPAN19P0C672 248 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 PBLDP30039 288 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 SMSP52788 366 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 MAPK12P53778 367 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 PCBP4P57723 403 aaKnown RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 CDK5Q00535 292 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 UBE3AQ05086 875 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 SLAMF1Q13291 335 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 DEF8Q6ZN54 512 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 C6orf120Q7Z4R8 191 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 NR4A3Q92570 626 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 FGF11Q92914 225 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 ZBED6CLQ96FA7 236 aaPredicted RBP16.78■□□□□ 0.28
RTN4-204ENST00000357732 GON7Q9BXV9 100 aa16.78■□□□□ 0.28
RTN4-204ENST00000357732 A4GNTQ9UNA3 340 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms