RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ZBTB18Q99592 522 aa14.53□□□□□ -0.08
TRIM13-201ENST00000356017 WDR77Q9BQA1 342 aaPredicted RBP14.53□□□□□ -0.08
TRIM13-201ENST00000356017 ING2Q9H160 280 aa14.53□□□□□ -0.08
TRIM13-201ENST00000356017 ZNF160Q9HCG1 818 aa14.53□□□□□ -0.08
TRIM13-201ENST00000356017 PPIEQ9UNP9 301 aaKnown RBP14.53□□□□□ -0.08
TRIM13-201ENST00000356017 IGF2RP11717 2491 aa14.53□□□□□ -0.08
TRIM13-201ENST00000356017 CHD8Q9HCK8 2581 aa14.53□□□□□ -0.08
TRIM13-201ENST00000356017 CCDC88CQ9P219 2028 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 ARGFXA6NJG6 315 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 A8MUA0 341 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 MYO1GB0I1T2 1018 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 C17orf105B2RV13 164 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 ANKRD28O15084 1053 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 PDPK1O15530 556 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 SLC22A3O75751 556 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 ITGB2P05107 769 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 MRPL19P49406 292 aaKnown RBP14.52□□□□□ -0.08
TRIM13-201ENST00000356017 BTBD16Q32M84 506 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 CAMKMTQ7Z624 323 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.08
TRIM13-201ENST00000356017 GALNT12Q8IXK2 581 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 CCDC116Q8IYX3 515 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 B3GNT7Q8NFL0 401 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 M1APQ8TC57 530 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 PTPMT1Q8WUK0 201 aaPredicted RBP14.52□□□□□ -0.08
TRIM13-201ENST00000356017 PPWD1Q96BP3 646 aaKnown RBP14.52□□□□□ -0.08
TRIM13-201ENST00000356017 COQ8BQ96D53 544 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 ZBED6CLQ96FA7 236 aaPredicted RBP14.52□□□□□ -0.08
TRIM13-201ENST00000356017 RABEP2Q9H5N1 569 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 TMEM45AQ9NWC5 275 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 ZIM2Q9NZV7 527 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 KCNMB2Q9Y691 235 aa14.52□□□□□ -0.08
TRIM13-201ENST00000356017 MYOCOSA0A1B0GUC4 107 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 SLITRK5O94991 958 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 NCF2P19878 526 aaPredicted RBP14.52□□□□□ -0.09
TRIM13-201ENST00000356017 NT5EP21589 574 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 SLC26A5P58743 744 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 SPRED3Q2MJR0 410 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 ZNF750Q32MQ0 723 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 ANKRD26P1Q6NSI1 321 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 FAM180BQ6P0A1 224 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 BORAQ6PGQ7 559 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 GPR155Q7Z3F1 870 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 SPATA21Q7Z572 469 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 KBTBD2Q8IY47 623 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 VPS37AQ8NEZ2 397 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 OR7A2PQ8NGA2 310 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 ZFP28Q8NHY6 868 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 MARK4Q96L34 752 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 BHLHE41Q9C0J9 482 aaPredicted RBP14.52□□□□□ -0.09
TRIM13-201ENST00000356017 FAM107BQ9H098 131 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 EPN3Q9H201 632 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 CLMPQ9H6B4 373 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 CXorf21Q9HAI6 301 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 ACSS1Q9NUB1 689 aaPredicted RBP14.52□□□□□ -0.09
TRIM13-201ENST00000356017 COPS7AQ9UBW8 275 aa14.52□□□□□ -0.09
TRIM13-201ENST00000356017 G3BP2Q9UN86 482 aaKnown RBP14.52□□□□□ -0.09
TRIM13-201ENST00000356017 A0A1W2PS29 197 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 SERPINA7P05543 415 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 LAMP1P11279 417 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 DRD4P21917 467 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 ATP4BP51164 291 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 PGDP52209 483 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 NCBP2P52298 156 aaKnown RBP eCLIP14.51□□□□□ -0.099e-8■■■□□ 18.8
TRIM13-201ENST00000356017 NME5P56597 212 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 SOX8P57073 446 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 UFM1P61960 85 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 MAP4K2Q12851 820 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 PGS1Q32NB8 556 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 IRAK1BP1Q5VVH5 260 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 NFAM1Q8NET5 270 aaPredicted RBP14.51□□□□□ -0.09
TRIM13-201ENST00000356017 OR8J2Q8NGG1 315 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 ERP27Q96DN0 273 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 SENP5Q96HI0 755 aaPredicted RBP14.51□□□□□ -0.09
TRIM13-201ENST00000356017 FBXL20Q96IG2 436 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 ELAC2Q9BQ52 826 aaKnown RBP14.51□□□□□ -0.09
TRIM13-201ENST00000356017 DUSP26Q9BV47 211 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 PRORYQ9H606 182 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 MMP25Q9NPA2 562 aa14.51□□□□□ -0.09
TRIM13-201ENST00000356017 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.51□□□□□ -0.09
TRIM13-201ENST00000356017 SHOX2O60902 331 aaPredicted RBP14.5□□□□□ -0.09
TRIM13-201ENST00000356017 IL6P05231 212 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 FRKP42685 505 aaPredicted RBP14.5□□□□□ -0.09
TRIM13-201ENST00000356017 KIR3DL1P43629 444 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 CLCN2P51788 898 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 MANFP55145 182 aaKnown RBP14.5□□□□□ -0.09
TRIM13-201ENST00000356017 SQLEQ14534 574 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 MLC1Q15049 377 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 PRICKLE4Q2TBC4 344 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 ZNF385BQ569K4 471 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 JMJD6Q6NYC1 403 aaPredicted RBP14.5□□□□□ -0.09
TRIM13-201ENST00000356017 VWA5B2Q8N398 1253 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 OR1N1Q8NGS0 311 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 SUN3Q8TAQ9 357 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 SLC2A12Q8TD20 617 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 ZNF675Q8TD23 568 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 C10orf82Q8WW14 230 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 VMP1Q96GC9 406 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 AMDHD1Q96NU7 426 aa14.5□□□□□ -0.09
TRIM13-201ENST00000356017 OR8D2Q9GZM6 311 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms