RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 XKR8Q9H6D3 395 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 DNAAF2Q9NVR5 837 aaKnown RBP21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 NDOR1Q9UHB4 597 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 KCNK6Q9Y257 313 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 KLK4Q9Y5K2 254 aa21.07■□□□□ 0.96
NKX2-1-201ENST00000354822 MAN2B1O00754 1011 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 NR2F1P10589 423 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 PIPP12273 146 aaPredicted RBP21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 FUT4P22083 530 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SNRPGP62308 76 aaKnown RBP21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 TRIM16LQ309B1 348 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 UAP1L1Q3KQV9 507 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 TOR1AIP1Q5JTV8 583 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SRFBP1Q8NEF9 429 aaKnown RBP21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 MCFD2Q8NI22 146 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 XAGE5Q8WWM1 108 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 DACH2Q96NX9 599 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SARGQ9BW04 601 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 BTBD2Q9BX70 525 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 REV1Q9UBZ9 1251 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 CCDC88CQ9P219 2028 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 FUOMA2VDF0 154 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 PRR19A6NJB7 356 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 OR10H3O60404 316 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 POU1F1P28069 291 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 KHKP50053 298 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 UGT2B15P54855 530 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 ITPRIPL2Q3MIP1 535 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 ARMCX4Q5H9R4 360 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 ZNF793Q6ZN11 406 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 LINC00471Q8N535 108 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 AMER2Q8N7J2 671 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 OR52E1Q8NGJ3 308 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SFXN5Q8TD22 340 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 MOAP1Q96BY2 351 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC17A9Q9BYT1 436 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 PBX4Q9BYU1 374 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SERHL2Q9H4I8 314 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 BCL2L10Q9HD36 194 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 ZCCHC3Q9NUD5 404 aaKnown RBP21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 SNX11Q9Y5W9 270 aa21.06■□□□□ 0.96
NKX2-1-201ENST00000354822 PRICKLE3O43900 615 aaPredicted RBP21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 BMP4P12644 408 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 GADD45AP24522 165 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 BCL6P41182 706 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 TNFRSF4P43489 277 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 TSFMP43897 325 aaKnown RBP21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 RGS6P49758 472 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 NCBP2P52298 156 aaKnown RBP eCLIP21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 CRISP3P54108 245 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 OXA1LQ15070 435 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 ZNF404Q494X3 552 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 DEF8Q6ZN54 512 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 KBTBD8Q8NFY9 601 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 BBS10Q8TAM1 723 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 KLK6Q92876 244 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 MS4A6EQ96DS6 147 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 GIN1Q9NXP7 522 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 TRPC4Q9UBN4 977 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 HEATR5BQ9P2D3 2071 aa21.05■□□□□ 0.96
NKX2-1-201ENST00000354822 TLR4O00206 839 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SLITRK5O94991 958 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 HIST1H1TP22492 207 aaPredicted RBP21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SLAMF1Q13291 335 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SYPL1Q16563 259 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 PPP2R2DQ66LE6 453 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 PLAG1Q6DJT9 500 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 BTLAQ7Z6A9 289 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 GANCQ8TET4 914 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 AICDAQ9GZX7 198 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 DSN1Q9H410 356 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 KLHL31Q9H511 634 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 FBXL12Q9NXK8 326 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 DAPK2Q9UIK4 370 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC9A8Q9Y2E8 581 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 GPSM3Q9Y4H4 160 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 HEBP2Q9Y5Z4 205 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 LAMA3Q16787 3333 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 MYO10Q9HD67 2058 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 A0A0G2JN53 185 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 EPOPA6NHQ4 379 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SEMA7AO75326 666 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 PTHP01270 115 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SLC15A1P46059 708 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 BCAP31P51572 246 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 COX10Q12887 443 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SEC23BQ15437 767 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SLX4IPQ5VYV7 408 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 MRM1Q6IN84 353 aaKnown RBP21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 ABHD17CQ6PCB6 329 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 TUBA3EQ6PEY2 450 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SYCE2Q6PIF2 218 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 TMEM184AQ6ZMB5 413 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 SZRD1Q7Z422 152 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 OR2L5Q8NG80 312 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 VANGL1Q8TAA9 524 aaPredicted RBP21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 UCN3Q969E3 161 aa21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 RSPO3Q9BXY4 272 aaPredicted RBP21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 ZBTB20Q9HC78 741 aaPredicted RBP21.04■□□□□ 0.96
NKX2-1-201ENST00000354822 PRDM7Q9NQW5 492 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms