RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 SLC25A23Q9BV35 468 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 SPATA9Q9BWV2 254 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 OSGIN1Q9UJX0 560 aa9.61□□□□□ -0.87
SYNE1-203ENST00000354674 A0A1W2PPC4 97 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NCF1BA6NI72 391 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NCF1CA8MVU1 366 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ARHGEF33A8MVX0 844 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 H3BM21 787 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ERN1O75460 977 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 SUPT7LO94864 414 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 FGF4P08620 206 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 HOXD4P09016 255 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NCF1P14598 390 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 SLC6A2P23975 617 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 PBLDP30039 288 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 HNF4AP41235 474 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 MTPNP58546 118 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CDK5R2Q13319 367 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 LAMTOR1Q6IAA8 161 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ERICH5Q6P6B1 374 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CEP76Q8TAP6 659 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 FAM174AQ8TBP5 190 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 GPR151Q8TDV0 419 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 EDAQ92838 391 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NSUN5Q96P11 429 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 MBOAT4Q96T53 435 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 GPR174Q9BXC1 333 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 TPSD1Q9BZJ3 242 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 BCL2L14Q9BZR8 327 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CD244Q9BZW8 370 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ZNF768Q9H5H4 540 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 TM7SF3Q9NS93 570 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 LRP4O75096 1905 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 SLCO1B7G3V0H7 640 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 H0Y8X5 98 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 TOXO94900 526 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CST1P01037 141 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 DCNP07585 359 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ANXA5P08758 320 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ALDOCP09972 364 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CXCL12P48061 93 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 HNMTP50135 292 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CLCNKAP51800 687 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 SH3BP2P78314 561 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 LCP2Q13094 533 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 GRB7Q14451 532 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 UGT3A2Q3SY77 523 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NDUFAF5Q5TEU4 345 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 PRMT9Q6P2P2 845 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ENPP6Q6UWR7 440 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CUZD1Q86UP6 607 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 PDZD3Q86UT5 571 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 KRT73Q86Y46 540 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 HIPK1Q86Z02 1210 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 AMER2Q8N7J2 671 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 DCBLD1Q8N8Z6 715 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 NLGN4YQ8NFZ3 816 aaPredicted RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 OR56A4Q8NGH8 313 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 ZDHHC5Q9C0B5 715 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 MMP27Q9H306 513 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 GALNT9Q9HCQ5 603 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 VTI1BQ9UEU0 232 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 YARS2Q9Y2Z4 477 aaKnown RBP9.6□□□□□ -0.87
SYNE1-203ENST00000354674 PCDHB14Q9Y5E9 798 aa9.6□□□□□ -0.87
SYNE1-203ENST00000354674 PRSS38A1L453 326 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 SSX5O60225 188 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 SLC22A5O76082 557 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 PRSS23O95084 383 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 C1orf105O95561 183 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 IFNA14P01570 189 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 SLC6A12P48065 614 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 AANATQ16613 207 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 C18orf21Q32NC0 220 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 USP39Q53GS9 565 aaKnown RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 LRFN4Q6PJG9 635 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 UNC5DQ6UXZ4 953 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 Q6ZPB1 254 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TMEM179BQ7Z7N9 219 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 FAM160A2Q8N612 972 aaPredicted RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 RLN3Q8WXF3 142 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 YIPF6Q96EC8 236 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 WDR92Q96MX6 357 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 KCNA7Q96RP8 456 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 BARD1Q99728 777 aaKnown RBP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 TRIM54Q9BYV2 358 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 FGF22Q9HCT0 170 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 ACSL5Q9ULC5 683 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 METTL12A8MUP2 240 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 MYO1GB0I1T2 1018 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 M0R129 80 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 MLYCDO95822 493 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 CSTF2P33240 577 aaKnown RBP eCLIP9.59□□□□□ -0.87
SYNE1-203ENST00000354674 RABIFP47224 123 aa9.59□□□□□ -0.87
SYNE1-203ENST00000354674 KCNK10P57789 538 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms