RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 OR6C75A6NL08 312 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 A8MU76 341 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DNALI1O14645 258 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 XPNPEP2O43895 674 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SYF2O95926 243 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TSHBP01222 138 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MT-ND1P03886 318 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RAF1P04049 648 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF18P17022 549 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CAPN2P17655 700 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 FOXG1P55316 489 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR1D5P58170 312 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PJVKQ0ZLH3 352 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 KIF5AQ12840 1032 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CNTN1Q12860 1018 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GPR50Q13585 617 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SNX1Q13596 522 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 KLF5Q13887 457 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OPCMLQ14982 345 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZMYND11Q15326 602 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PHKG1Q16816 387 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 IMMTQ16891 758 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CFAP157Q5JU67 520 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ATAD3BQ5T9A4 648 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ATL3Q6DD88 541 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 KCTD8Q6ZWB6 473 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TRMT11Q7Z4G4 463 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MRGPRGQ86SM5 289 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CTAGE6Q86UF2 777 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PLD3Q8IV08 490 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 UBQLNLQ8IYU4 475 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GCNT2Q8N0V5 402 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR4F17Q8NGA8 305 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR4F5Q8NH21 305 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR52N5Q8NH56 324 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MAGEC3Q8TD91 643 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DHTKD1Q96HY7 919 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PRAC1Q96KF2 57 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 BTBD9Q96Q07 612 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR4F4Q96R69 305 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TRIM9Q9C026 710 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PRO3102Q9H379 93 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 IKZF5Q9H5V7 419 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PLEK2Q9NYT0 353 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 FLRT3Q9NZU0 649 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DBF4Q9UBU7 674 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZNHIT2Q9UHR6 403 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LCMT1Q9UIC8 334 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 IKZF3Q9UKT9 509 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GREB1LQ9C091 1923 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MAST4O15021 2626 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 FER1L5A0AVI2 2057 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RNF222A6NCQ9 220 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 METTL21EPA6NDL7 271 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZNF195O14628 629 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 P2RX6O15547 441 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR1F1O43749 312 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SSX5O60225 188 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 HNRNPH3P31942 346 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 RDXP35241 583 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ANP32AP39687 249 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MAGEA5P43359 124 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CLCN4P51793 760 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CCZ1BP86790 482 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CCZ1P86791 482 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 EXOSC2Q13868 293 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SELPLGQ14242 412 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TMEM132DQ14C87 1099 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LCE1AQ5T7P2 110 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TAF3Q5VWG9 929 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLC27A4Q6P1M0 643 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CBLN3Q6UW01 205 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LINGO4Q6UY18 593 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLC24A5Q71RS6 500 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 PRUNE1Q86TP1 453 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LUZP1Q86V48 1076 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DCLK2Q8N568 766 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SLC37A3Q8NCC5 494 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 C17orf47Q8NEP4 570 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 OR13C5Q8NGS8 318 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MRPL24Q96A35 216 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 C2orf48Q96LS8 159 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 INPP4AQ96PE3 977 aaPredicted RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 GSDMCQ9BYG8 508 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 NACAP1Q9BZK3 213 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 SDCBP2Q9H190 292 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 TRPV6Q9H1D0 765 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 C10orf88Q9H8K7 445 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 C2orf42Q9NWW7 574 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 LHX3Q9UBR4 397 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 ZDHHC2Q9UIJ5 367 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 MRPS33Q9Y291 106 aaKnown RBP1.46□□□□□ -2.18
BRCA1-202ENST00000354071 DNAH7Q8WXX0 4024 aa1.46□□□□□ -2.18
BRCA1-202ENST00000354071 CFAP47Q6ZTR5 3102 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 CCDC88BA6NC98 1476 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 FAM47DPA6NHR8 397 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 SH2D1BO14796 132 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NXPH2O95156 264 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 EML2O95834 649 aa1.45□□□□□ -2.18
BRCA1-202ENST00000354071 NUDT3O95989 172 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms