RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 GAL3ST1Q99999 423 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 FICDQ9BVA6 458 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NUSAP1Q9BXS6 441 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 ACTR6Q9GZN1 396 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NRBP2Q9NSY0 501 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 KIAA1456Q9P272 454 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 COQ4Q9Y3A0 265 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 B3GALT1Q9Y5Z6 326 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 PKD1L3Q7Z443 1732 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SIPA1L3O60292 1781 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 ILVBLA1L0T0 632 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 FAM172BPA6NC97 362 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 MLNP12872 115 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 GCAP28676 217 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 S100A2P29034 98 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NTSP30990 170 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TFAMQ00059 246 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 RHAGQ02094 409 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RGS1Q08116 209 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 NIPAL4Q0D2K0 466 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TWF1Q12792 350 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 TRAF3Q13114 568 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SLBPQ14493 270 aaKnown RBP eCLIP5.69□□□□□ -1.5
RFC1-201ENST00000349703 Q6ZVU0 165 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 DTWD1Q8N5C7 304 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RNF148Q8N7C7 305 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 SLC38A5Q8WUX1 472 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 DNAJA4Q8WW22 397 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 ZNF606Q8WXB4 792 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 CENPNQ96H22 339 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 PRR11Q96HE9 360 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 HEXIM2Q96MH2 286 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 HOPXQ9BPY8 73 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 VN1R3Q9BXE9 311 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 RBM38Q9H0Z9 239 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 WDR76Q9H967 626 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 KCNQ5Q9NR82 932 aa5.69□□□□□ -1.5
RFC1-201ENST00000349703 UXTQ9UBK9 157 aaPredicted RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 NDRG4Q9ULP0 352 aaKnown RBP5.69□□□□□ -1.5
RFC1-201ENST00000349703 RGPD8O14715 1765 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 HELTA6NFD8 242 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 F8VP50 259 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SLC22A1O15245 554 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ADAM23O75077 832 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 MYO1DO94832 1006 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GPIP06744 558 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ADRB2P07550 413 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CTSAP10619 480 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TAL1P17542 331 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 AGTR2P50052 363 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SLC37A1P57057 533 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 MEF2AQ02078 507 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZNF266Q14584 549 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 USF2Q15853 346 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 SPATS1Q496A3 300 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 MTX3Q5HYI7 312 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RBM48Q5RL73 367 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZNF544Q6NX49 715 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 B3GLCTQ6Y288 498 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZNF813Q6ZN06 617 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 C1orf122Q6ZSJ8 110 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 USP30Q70CQ3 517 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 LRRC49Q8IUZ0 686 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GMCL1P1Q8NEA9 526 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 NPAS2Q99743 824 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CIB1Q99828 191 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 POLR3FQ9H1D9 316 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 KLHL31Q9H511 634 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 DHX35Q9H5Z1 703 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 FN3KRPQ9HA64 309 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 PLA2G3Q9NZ20 509 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TREM2Q9NZC2 230 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RAPGEFL1Q9UHV5 662 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GAKO14976 1311 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 PDZK1P1A8MUH7 402 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 I6L893 689 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 FGF10O15520 208 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 SLCO2B1O94956 709 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 HOXD13P35453 343 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 GRIA3P42263 894 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 TSFMP43897 325 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 BTN3A2P78410 334 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 RIPPLY1Q0D2K3 151 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 DLG2Q15700 870 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CTU2Q2VPK5 515 aaKnown RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 CATSPEREQ5SY80 951 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 CYP4A22Q5TCH4 519 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 MBLAC2Q68D91 279 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ANKRD16Q6P6B7 361 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 EPGNQ6UW88 154 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZNF704Q6ZNC4 412 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 NIPA1Q7RTP0 329 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ZFPM1Q8IX07 1006 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 LIX1Q8N485 282 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SLC7A13Q8TCU3 470 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 ROPN1LQ96C74 230 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 KCTD14Q9BQ13 255 aaPredicted RBP5.68□□□□□ -1.5
RFC1-201ENST00000349703 BCL7BQ9BQE9 202 aa5.68□□□□□ -1.5
RFC1-201ENST00000349703 SYT17Q9BSW7 474 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms