RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 NUDCD3Q8IVD9 361 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 CLYBLQ8N0X4 340 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 SUN3Q8TAQ9 357 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 NUBPLQ8TB37 319 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.52■□□□□ 0.88
SNX3-202ENST00000349379 THAP3Q8WTV1 239 aaPredicted RBP20.52■□□□□ 0.88
SNX3-202ENST00000349379 RIT1Q92963 219 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 ZNF681Q96N22 645 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 EBPLQ9BY08 206 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 STMN4Q9H169 189 aaPredicted RBP20.52■□□□□ 0.88
SNX3-202ENST00000349379 CXorf21Q9HAI6 301 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 TMBIM4Q9HC24 238 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 COPS7AQ9UBW8 275 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 ERVK-19Q9WJR5 959 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 DLGAP4Q9Y2H0 992 aa20.52■□□□□ 0.88
SNX3-202ENST00000349379 UBR5O95071 2799 aaPredicted RBP20.51■□□□□ 0.87
SNX3-202ENST00000349379 GNG14A0A1W2PPG7 69 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 TMEM233B4DJY2 109 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 SLC28A1O00337 649 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 DYRK3O43781 588 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 CLPSP04118 112 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 IL3P08700 152 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 DRD2P14416 443 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 ZNF763Q0D2J5 394 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 ZNF766Q5HY98 468 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 SPINK14Q6IE38 97 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 C16orf47Q6ZP98 133 aaPredicted RBP20.51■□□□□ 0.87
SNX3-202ENST00000349379 ATCAYQ86WG3 371 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 C9orf40Q8IXQ3 194 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 OR2T11Q8NH01 316 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 TLCD1Q96CP7 247 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 FCRL1Q96LA6 429 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 TAAR6Q96RI8 345 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 LRFN1Q9P244 771 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 YARS2Q9Y2Z4 477 aaKnown RBP20.51■□□□□ 0.87
SNX3-202ENST00000349379 FIS1Q9Y3D6 152 aa20.51■□□□□ 0.87
SNX3-202ENST00000349379 RELNP78509 3460 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 PRRC2CQ9Y520 2896 aaKnown RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 RGS14O43566 566 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 ATP1B1P05026 303 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 ANXA4P09525 319 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 CT62P0C5K7 136 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 NEFHP12036 1026 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 PORP16435 677 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 CYB561P49447 251 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 SLC37A1P57057 533 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 OC90Q02509 493 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 DUSP2Q05923 314 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 FUT7Q11130 342 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 ZNF267Q14586 743 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 ZNF750Q32MQ0 723 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 SH2D4BQ5SQS7 431 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 ZNF324BQ6AW86 544 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 HORMAD2Q8N7B1 307 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 OR5L2Q8NGL0 311 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 GRHL3Q8TE85 626 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 DOK4Q8TEW6 326 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 TWIST2Q8WVJ9 160 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 CNRIP1Q96F85 164 aaPredicted RBP20.5■□□□□ 0.87
SNX3-202ENST00000349379 CNPPD1Q9BV87 410 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 HES7Q9BYE0 225 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.5■□□□□ 0.87
SNX3-202ENST00000349379 EHD3Q9NZN3 535 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 ZDHHC2Q9UIJ5 367 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 PSME2Q9UL46 239 aa20.5■□□□□ 0.87
SNX3-202ENST00000349379 GOLGA6L10A6NI86 522 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 TCP11X1B4DZS4 312 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 CHEK2O96017 543 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 SERPINE1P05121 402 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 CD46P15529 392 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 CSNK2A2P19784 350 aaPredicted RBP20.49■□□□□ 0.87
SNX3-202ENST00000349379 SOX18P35713 384 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 ALDH9A1P49189 494 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 SSR4P51571 173 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 SLC18A1P54219 525 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 HEPACAMQ14CZ8 416 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 CEBPEQ15744 281 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 MPEG1Q2M385 716 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 NOXRED1Q6NXP6 359 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 GALNT12Q8IXK2 581 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 FAR1Q8WVX9 515 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 KLHL29Q96CT2 875 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 RASL10BQ96S79 203 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 LIN28AQ9H9Z2 209 aaKnown RBP20.49■□□□□ 0.87
SNX3-202ENST00000349379 LRTM1Q9HBL6 345 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 KCNK9Q9NPC2 374 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 MYNNQ9NPC7 610 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 AGPAT4Q9NRZ5 378 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 C1orf109Q9NX04 203 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 UTS2RQ9UKP6 389 aa20.49■□□□□ 0.87
SNX3-202ENST00000349379 WBP11Q9Y2W2 641 aaKnown RBP20.49■□□□□ 0.87
SNX3-202ENST00000349379 POLR3HQ9Y535 204 aaPredicted RBP20.49■□□□□ 0.87
SNX3-202ENST00000349379 MYO18BQ8IUG5 2567 aa20.48■□□□□ 0.87
SNX3-202ENST00000349379 TENM4Q6N022 2769 aa20.48■□□□□ 0.87
SNX3-202ENST00000349379 WDR91A4D1P6 747 aa20.48■□□□□ 0.87
SNX3-202ENST00000349379 TMEM114B3SHH9 223 aa20.48■□□□□ 0.87
SNX3-202ENST00000349379 WWP2O00308 870 aa20.48■□□□□ 0.87
SNX3-202ENST00000349379 LSM1O15116 133 aaKnown RBP20.48■□□□□ 0.87
SNX3-202ENST00000349379 ZNF354AO60765 605 aaPredicted RBP20.48■□□□□ 0.87
SNX3-202ENST00000349379 VPS4BO75351 444 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms