RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 TOMM5Q8N4H5 51 aa17.77■□□□□ 0.43
UBE3C-201ENST00000348165 FAM86B1Q8N7N1 296 aa17.77■□□□□ 0.43
UBE3C-201ENST00000348165 MFSD2AQ8NA29 543 aa17.77■□□□□ 0.43
UBE3C-201ENST00000348165 ZNF639Q9UID6 485 aa17.77■□□□□ 0.43
UBE3C-201ENST00000348165 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 APBB3O95704 486 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 PDHA2P29803 388 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 GSTM4Q03013 218 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 MANEALQ5VSG8 457 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 RHBDF1Q96CC6 855 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 CCDC88AQ3V6T2 1871 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 CLCN2P51788 898 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 NSDHLQ15738 373 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 SCGB2B2Q4G0G5 96 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 ABCA11PQ4W5N1 156 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 CBARPQ8N350 705 aaPredicted RBP17.76■□□□□ 0.43
UBE3C-201ENST00000348165 C16orf78Q8WTQ4 265 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 USP3Q9Y6I4 520 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 A0A1W2PPL8 197 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 A0A1W2PPW3 197 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 OR14I1A6ND48 311 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 SNNO75324 88 aaPredicted RBP17.76■□□□□ 0.43
UBE3C-201ENST00000348165 SCGNO76038 276 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 SPARCP09486 303 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 CKMT1AP12532 417 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
UBE3C-201ENST00000348165 PIGFQ07326 219 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 ZNF423Q2M1K9 1284 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 LRIT3Q3SXY7 679 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 PLXDC1Q8IUK5 500 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 MAL2Q969L2 176 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 TMEM184CQ9NVA4 438 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 UCKL1Q9NWZ5 548 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 RARRES3Q9UL19 164 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 C5orf51A6NDU8 294 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 ADAMTS4O75173 837 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 ADORA3P0DMS8 318 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 RABIFP47224 123 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 RGRP47804 291 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 GTDC1Q4AE62 458 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 VTCN1Q7Z7D3 282 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 SPAG16Q8N0X2 631 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 ANKFN1Q8N957 763 aa17.76■□□□□ 0.43
UBE3C-201ENST00000348165 DEFA5Q01523 94 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 RIN1Q13671 783 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 WSCD2Q2TBF2 565 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 NDUFAF5Q5TEU4 345 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 PAQR9Q6ZVX9 377 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 OR7G3Q8NG95 312 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 FNDC8Q8TC99 324 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 C12orf43Q96C57 262 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ANKRD12Q6UB98 2062 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 A0A1B0GVI7 797 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 FAAHO00519 579 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 TAS2R38P59533 333 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 UGT3A2Q3SY77 523 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ANKDD1AQ495B1 522 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 CHCHD4Q8N4Q1 142 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 OR2T33Q8NG76 320 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 SHKBP1Q8TBC3 707 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ASB12Q8WXK4 309 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 SLC22A4Q9H015 551 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 SRA1Q9HD15 236 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 GPRC5BQ9NZH0 403 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 CD207Q9UJ71 328 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 KDM4BO94953 1096 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 NAA10P41227 235 aaPredicted RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 GCGRP47871 477 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 EFR3AQ14156 821 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 GRM7Q14831 915 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ENDOVQ8N8Q3 282 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ADAMTS6Q9UKP5 1117 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 METTL21EPA6NDL7 271 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 GADD45AP24522 165 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 RAB2AP61019 212 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 CRYZQ08257 329 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.75■□□□□ 0.435e-7■■■□□ 18.7
UBE3C-201ENST00000348165 SLC7A6OSQ96CW6 309 aaPredicted RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 CXCL16Q9H2A7 254 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ZNF334Q9HCZ1 680 aaPredicted RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 PPP4R1LQ9P1A2 415 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 PTBP2Q9UKA9 531 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 RABL2BQ9UNT1 228 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 RPS3P23396 243 aaKnown RBP eCLIP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 ZNF782Q6ZMW2 699 aaPredicted RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 SLITRK4Q8IW52 837 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 TMEM19Q96HH6 336 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 OR1F2PQ96R84 312 aa17.75■□□□□ 0.43
UBE3C-201ENST00000348165 CDCA3Q99618 268 aaPredicted RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 EIF3KQ9UBQ5 218 aaKnown RBP17.75■□□□□ 0.43
UBE3C-201ENST00000348165 EIF3FO00303 357 aaPredicted RBP17.74■□□□□ 0.43
UBE3C-201ENST00000348165 SOX9P48436 509 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 FOXA1P55317 472 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 RAB41Q5JT25 222 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 ULK3Q6PHR2 472 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 PARS2Q7L3T8 475 aaKnown RBP17.74■□□□□ 0.43
UBE3C-201ENST00000348165 TOX2Q96NM4 488 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 APOOQ9BUR5 198 aa17.74■□□□□ 0.43
UBE3C-201ENST00000348165 FBRSQ9HAH7 460 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms