RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 AKAP1Q92667 903 aaKnown RBP eCLIP15.1■□□□□ 0.017e-12■■■■□ 24.8
HMGA1-202ENST00000347617 VOPP1Q96AW1 172 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SCRN2Q96FV2 425 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SMIM14Q96QK8 99 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SOSTQ9BQB4 213 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SUV39H2Q9H5I1 410 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 FOLH1BQ9HBA9 442 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 TMCC3Q9ULS5 477 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 DIMT1Q9UNQ2 313 aaKnown RBP15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SLC27A6Q9Y2P4 619 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 PRSS21Q9Y6M0 314 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 FAM240BA0A1B0GVZ2 78 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ENTPD6O75354 484 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 RFPL3O75679 317 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ADH1CP00326 375 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 NUDT7P0C024 238 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-202ENST00000347617 CYP2A6P11509 494 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-202ENST00000347617 NNMTP40261 264 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 SOX3P41225 446 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 GSTM5P46439 218 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 PNLIPRP1P54315 467 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 POLR2LP62875 67 aaKnown RBP15.09■□□□□ 0.01
HMGA1-202ENST00000347617 DHCR24Q15392 516 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.09■□□□□ 0.013e-6■□□□□ 10.5
HMGA1-202ENST00000347617 CASP12Q6UXS9 341 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 TAGAPQ8N103 731 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 NAGSQ8N159 534 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 GHDCQ8N2G8 530 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 NXPE1Q8N323 547 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 VN1R2Q8NFZ6 395 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 OR4A15Q8NGL6 344 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 TMEM163Q8TC26 289 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 CREB3L1Q96BA8 519 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 MAP6Q96JE9 813 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 COPS8Q99627 209 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 BOCQ9BWV1 1114 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 PBX4Q9BYU1 374 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ZFYVE1Q9HBF4 777 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ATP6V1HQ9UI12 483 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 KCND3Q9UK17 655 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 ANGPT4Q9Y264 503 aa15.09■□□□□ 0.01
HMGA1-202ENST00000347617 GLYATL1P3A0A0U1RQE8 302 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 LINC00854A0A1B0GVQ3 168 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 BET1O15155 118 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 CISD3P0C7P0 127 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 SPAM1P38567 509 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 CTSOP43234 321 aaPredicted RBP15.08■□□□□ 0.01
HMGA1-202ENST00000347617 WSCD2Q2TBF2 565 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 PLK5Q496M5 336 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 SPIN4Q56A73 249 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 ZDHHC20Q5W0Z9 365 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 MZT2AQ6P582 158 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF730Q6ZMV8 503 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 AMIGO1Q86WK6 493 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 OR52J3Q8NH60 311 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 SMARCD2Q92925 531 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 LRIG1Q96JA1 1093 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 DCLRE1CQ96SD1 692 aaKnown RBP15.08■□□□□ 0.01
HMGA1-202ENST00000347617 NELL2Q99435 816 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 EBPLQ9BY08 206 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.08■□□□□ 0.014e-6■■■■□ 20.4
HMGA1-202ENST00000347617 NMNAT1Q9HAN9 279 aaPredicted RBP15.08■□□□□ 0.01
HMGA1-202ENST00000347617 ING4Q9UNL4 249 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 WNT6Q9Y6F9 365 aa15.08■□□□□ 0.01
HMGA1-202ENST00000347617 NUP214P35658 2090 aaPredicted RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 AGAP14A8MT82 685 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 SLC30A4O14863 429 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 PCDH17O14917 1159 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 LYRM1O43325 122 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 AP2A2O94973 939 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 RAB36O95755 333 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 IFNW1P05000 195 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ADRA2AP08913 450 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 FAM157BP0CG42 384 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 PSKH1P11801 424 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 FGF9P31371 208 aaPredicted RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 MAPK12P53778 367 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 SMIM11AP58511 58 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ZNF91Q05481 1191 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 CHIT1Q13231 466 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 SUZ12Q15022 739 aaKnown RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 KLHL22Q53GT1 634 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 C3orf38Q5JPI3 329 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ZBTB37Q5TC79 503 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ZNF770Q6IQ21 691 aaPredicted RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 TPRG1Q6ZUI0 275 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 NLGN4YQ8NFZ3 816 aaPredicted RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 LRRC20Q8TCA0 184 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 GTPBP3Q969Y2 492 aaKnown RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 C11orf24Q96F05 449 aaPredicted RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 GPR137Q96N19 417 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ASB16Q96NS5 453 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 TEFMQ96QE5 360 aaKnown RBP15.08■□□□□ 0
HMGA1-202ENST00000347617 BEX2Q9BXY8 128 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 PIGUQ9H490 435 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 PPP1R3EQ9H7J1 279 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 ZDHHC3Q9NYG2 299 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 GLTPQ9NZD2 209 aa15.08■□□□□ 0
HMGA1-202ENST00000347617 HSPB11Q9Y547 144 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms