RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 ATP1B1P05026 303 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 SSR4P51571 173 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 SLC37A1P57057 533 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
CLTA-202ENST00000345519 ZNF844Q08AG5 666 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 IFFO1Q0D2I5 559 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 FUT7Q11130 342 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 EIF2S3LQ2VIR3 472 aaKnown RBP18.38■□□□□ 0.53
CLTA-202ENST00000345519 GALNTL5Q7Z4T8 443 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 HOMEZQ8IX15 550 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 SRRM1Q8IYB3 904 aaKnown RBP18.38■□□□□ 0.53
CLTA-202ENST00000345519 CYP4Z2PQ8N1L4 340 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 CCNYL1Q8N7R7 359 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 OR5L2Q8NGL0 311 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 OR6Y1Q8NGX8 325 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 THAP3Q8WTV1 239 aaPredicted RBP18.38■□□□□ 0.53
CLTA-202ENST00000345519 PPWD1Q96BP3 646 aaKnown RBP18.38■□□□□ 0.53
CLTA-202ENST00000345519 CXorf21Q9HAI6 301 aa18.38■□□□□ 0.53
CLTA-202ENST00000345519 CRYBG3Q68DQ2 2970 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ZNF407Q9C0G0 2248 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ZNF354AO60765 605 aaPredicted RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 TRIM13O60858 407 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 NADKO95544 446 aaPredicted RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 STSP08842 583 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 TNNI3P19429 210 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 PIK3R1P27986 724 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 SOX18P35713 384 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ETV4P43268 484 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ST13P50502 369 aaKnown RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 PMP22Q01453 160 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 EBPQ15125 230 aaKnown RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 CEBPEQ15744 281 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ZNF441Q8N8Z8 693 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ZFP62Q8NB50 900 aaPredicted RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 GOLM1Q8NBJ4 401 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 OR4K14Q8NGD5 310 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.37■□□□□ 0.536e-9■□□□□ 10.9
CLTA-202ENST00000345519 RIT1Q92963 219 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 APIPQ96GX9 242 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 ZNF681Q96N22 645 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 PSMG3-AS1Q96PY0 264 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 GATA5Q9BWX5 397 aaPredicted RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 SHCBP1LQ9BZQ2 653 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 SH2D2AQ9NP31 389 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLTA-202ENST00000345519 KLF13Q9Y2Y9 288 aaPredicted RBP18.37■□□□□ 0.53
CLTA-202ENST00000345519 DNAJC13O75165 2243 aa18.37■□□□□ 0.53
CLTA-202ENST00000345519 PCDH7O60245 1069 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
CLTA-202ENST00000345519 UROSP10746 265 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 CPMP14384 443 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 TIA1P31483 386 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLTA-202ENST00000345519 SOX3P41225 446 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 ERVK-8P63133 956 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 HMGCS1Q01581 520 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 PIGGQ5H8A4 983 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 LYPD8Q6UX82 237 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 C16orf47Q6ZP98 133 aaPredicted RBP18.36■□□□□ 0.53
CLTA-202ENST00000345519 MDGA2Q7Z553 956 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 TMEM156Q8N614 296 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 SLC15A4Q8N697 577 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 ZNF615Q8N8J6 731 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 POGLUT1Q8NBL1 392 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 FAM98AQ8NCA5 519 aaKnown RBP18.36■□□□□ 0.53
CLTA-202ENST00000345519 C17orf47Q8NEP4 570 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 C16orf52Q8NHV5 167 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 FAM76AQ8TAV0 307 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 TCP10LQ8TDR4 215 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 CTHRC1Q96CG8 243 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 FAM111AQ96PZ2 611 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 SSU72Q9NP77 194 aaKnown RBP18.36■□□□□ 0.53
CLTA-202ENST00000345519 KLHL1Q9NR64 748 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 SLC17A7Q9P2U7 560 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 ZNF639Q9UID6 485 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 ERVK-19Q9WJR5 959 aa18.36■□□□□ 0.53
CLTA-202ENST00000345519 FREM3P0C091 2139 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 NINQ8N4C6 2090 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 OR10H2O60403 315 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 NPHS1O60500 1241 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 OR6B1O95007 311 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 DRD2P14416 443 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 CREB1P16220 341 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 PORP16435 677 aaPredicted RBP18.35■□□□□ 0.53
CLTA-202ENST00000345519 S1PR1P21453 382 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ACSM2AQ08AH3 577 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 MGAT2Q10469 447 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ASPHQ12797 758 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ELOAQ14241 798 aaKnown RBP18.35■□□□□ 0.53
CLTA-202ENST00000345519 KIAA0040Q15053 153 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 PRICKLE4Q2TBC4 344 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 CFAP157Q5JU67 520 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ACSM2BQ68CK6 577 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 GALNT12Q8IXK2 581 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 DND1Q8IYX4 353 aaKnown RBP18.35■□□□□ 0.53
CLTA-202ENST00000345519 MMP21Q8N119 569 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 CCDC63Q8NA47 563 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 PSD4Q8NDX1 1056 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 ASB15Q8WXK1 588 aa18.35■□□□□ 0.53
CLTA-202ENST00000345519 TMEM125Q96AQ2 219 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms