RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 BRF2Q9HAW0 419 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 HPF1Q9NWY4 346 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 COPS7AQ9UBW8 275 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 ADAM29Q9UKF5 820 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 SNX6Q9UNH7 406 aa13.36□□□□□ -0.27
HMGN3-202ENST00000344726 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
HMGN3-202ENST00000344726 ASNA1O43681 348 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-202ENST00000344726 PROCP04070 461 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 PRF1P14222 555 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ZNF24P17028 368 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 PTGER1P34995 402 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 VSNL1P62760 191 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ERVK-8P63133 956 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-202ENST00000344726 RASA2Q15283 850 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ZNF750Q32MQ0 723 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 CCNYL2Q5T2Q4 361 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 NDUFAF5Q5TEU4 345 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 GPRIN3Q6ZVF9 776 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 PAGE2Q7Z2X7 111 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 SPPL2CQ8IUH8 684 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 SLC22A9Q8IVM8 553 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ZFP62Q8NB50 900 aaPredicted RBP13.35□□□□□ -0.27
HMGN3-202ENST00000344726 C7orf57Q8NEG2 295 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 KCNA7Q96RP8 456 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 CNPPD1Q9BV87 410 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 AHSPQ9NZD4 102 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 DCDC2Q9UHG0 476 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ERVK-11Q9UQG0 969 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 ERVK-19Q9WJR5 959 aa13.35□□□□□ -0.27
HMGN3-202ENST00000344726 PRSS44E7EML9 344 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 UBFD1O14562 309 aaKnown RBP13.34□□□□□ -0.27
HMGN3-202ENST00000344726 OR10H2O60403 315 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 GLRA3O75311 464 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 CT62P0C5K7 136 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 MAPK12P53778 367 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 SLC37A1P57057 533 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 RBPJQ06330 500 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 ASPHQ12797 758 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 LCP2Q13094 533 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 MPEG1Q2M385 716 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 KRTCAP3Q53RY4 240 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 PIGGQ5H8A4 983 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 LYPD8Q6UX82 237 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 ZYG11AQ6WRX3 759 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 MRGPRGQ86SM5 289 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 GPALPP1Q8IXQ4 340 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 C1orf52Q8N6N3 182 aaKnown RBP13.34□□□□□ -0.27
HMGN3-202ENST00000344726 OR5L2Q8NGL0 311 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 OR2W6PQ8NHA6 318 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 METTL6Q8TCB7 284 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 RIT1Q92963 219 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 TM4SF18Q96CE8 201 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 PELOQ9BRX2 385 aaKnown RBP13.34□□□□□ -0.27
HMGN3-202ENST00000344726 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 CES1P1Q9UKY3 287 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 TIMM22Q9Y584 194 aa13.34□□□□□ -0.27
HMGN3-202ENST00000344726 FBN2P35556 2912 aa13.33□□□□□ -0.27
HMGN3-202ENST00000344726 DCHS2Q6V1P9 2916 aa13.33□□□□□ -0.27
HMGN3-202ENST00000344726 PKDREJQ9NTG1 2253 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 LRBAP50851 2863 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 G3V3Y1 287 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 ADAM10O14672 748 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 HS6ST1O60243 411 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 PLIN3O60664 434 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 KRT15P19012 456 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 PIK3R1P27986 724 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 SSTR4P31391 388 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 GALNSP34059 522 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 CRHR1P34998 444 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 XKP51811 444 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 FOXA1P55317 472 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 RAE1P78406 368 aaKnown RBP13.33□□□□□ -0.28
HMGN3-202ENST00000344726 DUSP2Q05923 314 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.33□□□□□ -0.28
HMGN3-202ENST00000344726 CMPK2Q5EBM0 449 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 C3P1Q6ZMU1 363 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 POGLUT1Q8NBL1 392 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 OR4K14Q8NGD5 310 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 OR52N2Q8NGI0 321 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 AGAP11Q8TF27 550 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 CHTF18Q8WVB6 975 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.28
HMGN3-202ENST00000344726 ART5Q96L15 291 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 WWTR1Q9GZV5 400 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 ENTPD4Q9Y227 616 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
HMGN3-202ENST00000344726 PCDHA9Q9Y5H5 950 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms