RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 RUBCNLQ9H714 662 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 TMEM181Q9P2C4 612 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 CHST2Q9Y4C5 530 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 HRH3Q9Y5N1 445 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ACACBO00763 2458 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 TPRP12270 2363 aaKnown RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 FAM234BA2RU67 622 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 UPK1AO00322 258 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 SEMA3DO95025 777 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 BMP10O95393 424 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ANPEPP15144 967 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ME2P23368 584 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 XCR1P46094 333 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ATP4BP51164 291 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 IST1P53990 364 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 STX5Q13190 355 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 SPIDRQ14159 915 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 GK3PQ14409 553 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.85□□□□□ -1.31
GDNF-202ENST00000344622 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 FHL5Q5TD97 284 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 TMEM107Q6UX40 140 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 GLRX5Q86SX6 157 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 NUDT13Q86X67 352 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ZC3H7AQ8IWR0 971 aaKnown RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 TMEM132CQ8N3T6 1108 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 LRTOMTQ8WZ04 291 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 SERPINI1Q99574 410 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 YIPF4Q9BSR8 244 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 RTN4RQ9BZR6 473 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 QRSL1Q9H0R6 528 aaKnown RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 REEP4Q9H6H4 257 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 RPF2Q9H7B2 306 aaKnown RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 NMRK1Q9NWW6 199 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 ATP6V1HQ9UI12 483 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 PLCL2Q9UPR0 1127 aa6.85□□□□□ -1.31
GDNF-202ENST00000344622 EIF3LQ9Y262 564 aaKnown RBP6.85□□□□□ -1.31
GDNF-202ENST00000344622 CSO75390 466 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 ERAL1O75616 437 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 SCRG1O75711 98 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 NTN1O95631 604 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 EPPINO95925 133 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 RHAGQ02094 409 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TNFRSF17Q02223 184 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 EXOSC7Q15024 291 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 HIST2H2ACQ16777 129 aaPredicted RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 C3orf38Q5JPI3 329 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 HIST2H2AA3Q6FI13 130 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 FAAH2Q6GMR7 532 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 C16orf89Q6UX73 402 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 ZNF621Q6ZSS3 439 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 SZRD1Q7Z422 152 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 PTPMT1Q8WUK0 201 aaPredicted RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 SLC39A7Q92504 469 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 FIG4Q92562 907 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 PKP2Q99959 881 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 WDR77Q9BQA1 342 aaPredicted RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 ALG2Q9H553 416 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 ABCD2Q9UBJ2 740 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TMED5Q9Y3A6 229 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 IGKV3D-11A0A0A0MRZ8 115 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TMEM200CA6NKL6 621 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 PDLIM1O00151 329 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TERTO14746 1132 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 RFPL3O75679 317 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 DIRAS1O95057 198 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TNFRSF1BP20333 461 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 GRK3P35626 688 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 MC3RP41968 323 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 NRF1Q16656 503 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 PRICKLE4Q2TBC4 344 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TRMT5Q32P41 509 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 LRIF1Q5T3J3 769 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 TRIM40Q6P9F5 258 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 NET1Q7Z628 596 aaPredicted RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 TSEN54Q7Z6J9 526 aaKnown RBP6.84□□□□□ -1.31
GDNF-202ENST00000344622 GALNT4Q8N4A0 578 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 RAB42Q8N4Z0 105 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 DUSP26Q9BV47 211 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 VN1R1Q9GZP7 353 aa6.84□□□□□ -1.31
GDNF-202ENST00000344622 MYO1GB0I1T2 1018 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ARPC2O15144 300 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ADAM11O75078 769 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 NSA2O95478 260 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 OPN1SWP03999 348 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 SSTR4P31391 388 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 MAN2A2P49641 1150 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 NAA20P61599 178 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RHBDD2Q6NTF9 364 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 FAM198BQ6UWH4 519 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RABEPKQ7Z6M1 372 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 DPP10Q8N608 796 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 GALNT6Q8NCL4 622 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 ZFP90Q8TF47 636 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 RERGQ96A58 199 aaPredicted RBP6.83□□□□□ -1.32
GDNF-202ENST00000344622 CTHRC1Q96CG8 243 aa6.83□□□□□ -1.32
GDNF-202ENST00000344622 FAM120BQ96EK7 910 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms