RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 HNRNPH3P31942 346 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 MAP2K4P45985 399 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 LEPRP48357 1165 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 NR0B1P51843 470 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 EPHA4P54764 986 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CRYZQ08257 329 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 GK3PQ14409 553 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 RBMS2Q15434 407 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 MEP1AQ16819 746 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 MLIPQ5VWP3 458 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CMC1Q7Z7K0 106 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 NATD1Q8N6N6 113 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 C5orf34Q96MH7 638 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 TSSK3Q96PN8 268 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 B3GNT5Q9BYG0 378 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SPATA31A6Q5VVP1 1343 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 A0A1B0GV72 72 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ANXA4P09525 319 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 USP17L7P0C7H9 530 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 YBX3P16989 372 aaKnown RBP eCLIP5.93□□□□□ -1.46
VCAN-203ENST00000343200 USF1P22415 310 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 TAGLN2P37802 199 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 LSSP48449 732 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 GATMP50440 423 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SPCS2Q15005 226 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 S100A7AQ86SG5 101 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 LSMEM2Q8N112 164 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CELF1Q92879 486 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 TBX5Q99593 518 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 NMNAT1Q9HAN9 279 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 MRM3Q9HC36 420 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 KCMF1Q9P0J7 381 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PUS1Q9Y606 427 aaKnown RBP eCLIP5.93□□□□□ -1.46
VCAN-203ENST00000343200 GSG1L2A8MUP6 293 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ALX3O95076 343 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ERBB2P04626 1255 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 AKAIN1P0CW23 69 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 GNRHRP30968 328 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 NDUFA6P56556 154 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 STEAP4Q687X5 459 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 EPGNQ6UW88 154 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 BEND7Q8N7W2 519 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 OR6Q1Q8NGQ2 317 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 TAS1R2Q8TE23 839 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 TMEM18Q96B42 140 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 MYO19Q96H55 970 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PHIPQ8WWQ0 1821 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ABCC3O15438 1527 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 GPR75-ASB3A0A0A6YYF3 556 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CDHR4A6H8M9 788 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 B3GAT3O94766 335 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 RPP14O95059 124 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 RAC2P15153 192 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 HLCSP50747 726 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 KLF1Q13351 362 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 IKBKEQ14164 716 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 KIAA0930Q6ICG6 404 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 TSSK4Q6SA08 328 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 RBMS3Q6XE24 437 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 ZNF679Q8IYX0 411 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 C1orf52Q8N6N3 182 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 OR6J1Q8NGC5 347 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 OXSMQ9NWU1 459 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 B3GNT2Q9NY97 397 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ZFR2Q9UPR6 939 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 UBE2J1Q9Y385 318 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 ASB3Q9Y575 518 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 LMTK2Q8IWU2 1503 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SLC37A4O43826 429 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ERAL1O75616 437 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 ESR1P03372 595 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 THP07101 528 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PFKMP08237 780 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 DNAJB1P25685 340 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CRKLP46109 303 aaKnown RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 NUDT6P53370 316 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CAPSQ13938 189 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 ZNF74Q16587 644 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 MFSD14CQ5VZR4 134 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SLC27A4Q6P1M0 643 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 HFE2Q6ZVN8 426 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CEACAM19Q7Z692 300 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PHYKPLQ8IUZ5 450 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 OR1M1Q8NGA1 313 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SMIM12Q96EX1 92 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 STRA6Q9BX79 667 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 EBPLQ9BY08 206 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 PRRG4Q9BZD6 226 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 NIPAL2Q9H841 368 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SOHLH2Q9NX45 425 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CXXC1Q9P0U4 656 aaPredicted RBP5.93□□□□□ -1.46
VCAN-203ENST00000343200 ZNHIT2Q9UHR6 403 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 SLC7A4O43246 635 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 B4GAT1O43505 415 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 CTDNEP1O95476 244 aa5.93□□□□□ -1.46
VCAN-203ENST00000343200 MMP10P09238 476 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms