RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LCN9Q8WX39 176 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 IRF7Q92985 503 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 VMP1Q96GC9 406 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PDLIM5Q96HC4 596 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 FAM46AQ96IP4 442 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 BRD7Q9NPI1 651 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 RIIAD1A6NNX1 92 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 SOD2P04179 222 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 SEC13P55735 322 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 RBBP4Q09028 425 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 BIKQ13323 160 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 SP140Q13342 867 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 GAB1Q13480 694 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 KDM4DQ6B0I6 523 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF431Q8TF32 576 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 MCHR1Q99705 422 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 OR2B2Q9GZK3 357 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 KCNN2Q9H2S1 579 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 MRPS30Q9NP92 439 aaKnown RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 NANSQ9NR45 359 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 NDUFAF4Q9P032 175 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 NFKBIL1Q9UBC1 381 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PSORS1C1Q9UIG5 152 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PCDHGA6Q9Y5G7 932 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 RASGRP1O95267 797 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 ALAS2P22557 587 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 UQCRC2P22695 453 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 HLA-FP30511 346 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 MPIP34949 423 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PPM1AP35813 382 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF81P51508 661 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 HTRA3P83110 453 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 TBCEQ15813 527 aaPredicted RBP11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 SYPL1Q16563 259 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 COL24A1Q17RW2 1714 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 LRRC26Q2I0M4 334 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 TMEM107Q6UX40 140 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 TOMM5Q8N4H5 51 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 OR8K5Q8NH50 307 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 TESCQ96BS2 214 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 COQ8BQ96D53 544 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
SNRNP48-201ENST00000342415 LOC102723532A0A0G2JNH3 316 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 NCR1O76036 304 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ACADMP11310 421 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 IL7P13232 177 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF30P17039 623 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 DRD5P21918 477 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 IDSP22304 550 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 CBLP22681 906 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 KHKP50053 298 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 HYAL2Q12891 473 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 DUSP7Q16829 419 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 C2orf27AQ580R0 203 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 AFMIDQ63HM1 303 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 FCRLBQ6BAA4 426 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 KIAA1324Q6UXG2 1013 aaKnown RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 GET4Q7L5D6 327 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 MMP21Q8N119 569 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF557Q8N988 423 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 OR4E2Q8NGC2 313 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 SMPDL3AQ92484 453 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 NEDD4LQ96PU5 975 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 KLF16Q9BXK1 252 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF717Q9BY31 904 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 RGS17Q9UGC6 210 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 BTNL2Q9UIR0 455 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 SBF2Q86WG5 1849 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 A0A1W2PRG6 482 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 FAM25EA8MYX2 175 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 EFCAB14O75071 495 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 OR6A2O95222 327 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ADH1CP00326 375 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC19A1P41440 591 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 MTNR1AP48039 350 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 MAN2A2P49641 1150 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 AKR1D1P51857 326 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 GNG2P59768 71 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 RGS1Q08116 209 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 DSC1Q08554 894 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 RBM45Q8IUH3 476 aaKnown RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 C10orf111Q8N326 155 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 CCDC59Q9P031 241 aaKnown RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 NCKAP1Q9Y2A7 1128 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 MED16Q9Y2X0 877 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 PTPRFP10586 1907 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 OR2A25A4D2G3 310 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 CLDN24A6NM45 220 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF821O75541 412 aaPredicted RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 OSMP13725 252 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 EIF2DP41214 584 aaKnown RBP11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC46A3Q7Z3Q1 461 aa11.83□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF655Q8N720 491 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms