RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ANKDD1BA6NHY2 528 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 H2AFYO75367 372 aaKnown RBP14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 CLPSP04118 112 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 CCDC175P0C221 793 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 CPOXP36551 454 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 MC3RP41968 323 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 HERVK_113P63132 956 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 ERVK-8P63133 956 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 TOMM20Q15388 145 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 C22orf34Q6ZV56 151 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 ADGRE4PQ86SQ3 457 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 TMEM139Q8IV31 216 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 NTNG2Q96CW9 530 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 FBXL20Q96IG2 436 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 DGAT2Q96PD7 388 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 ERVK-6Q9BXR3 956 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 ANGPTL4Q9BY76 406 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 NT5DC2Q9H857 520 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 ERVK-19Q9WJR5 959 aa14.9□□□□□ -0.02
NECTIN1-202ENST00000340882 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 WASHC1A8K0Z3 465 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 GNB5O14775 395 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 SH3BGRLO75368 114 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 PRKRAO75569 313 aaKnown RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 TNFSF13O75888 250 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 SOX30O94993 753 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 CYP4B1P13584 511 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 GNAZP19086 355 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 CD22P20273 847 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 CRYGSP22914 178 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 ATP5A1P25705 553 aaKnown RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 CCKARP32238 428 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 SLC6A12P48065 614 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 RCAN2Q14206 197 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 RCN2Q14257 317 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 EBPQ15125 230 aaKnown RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 C10orf62Q5T681 223 aaPredicted RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 PODNL1Q6PEZ8 512 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 DND1Q8IYX4 353 aaKnown RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 ZNF441Q8N8Z8 693 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 GPATCH11Q8N954 259 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 ACOT4Q8N9L9 421 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 MCUQ8NE86 351 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 FAM83FQ8NEG4 500 aaPredicted RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 SPPL2AQ8TCT8 520 aa14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 TEX10Q9NXF1 929 aaPredicted RBP14.89□□□□□ -0.03
NECTIN1-202ENST00000340882 BANF1O75531 89 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 KRT14P02533 472 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 FGGP02679 453 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 COX7A2P14406 83 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 PTPN6P29350 595 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 CASP3P42574 277 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 RPL21P46778 160 aaKnown RBP14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 MASP1P48740 699 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 SLC37A1P57057 533 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 SRYQ05066 204 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 DMTNQ08495 405 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 CRYMQ14894 314 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 FBXO48Q5FWF7 155 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 TBCELQ5QJ74 424 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 DESI1Q6ICB0 168 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 HEPHL1Q6MZM0 1159 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 TTC27Q6P3X3 843 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 C20orf204Q6ZNR8 217 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 ZNF550Q7Z398 422 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 KRT78Q8N1N4 520 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 TMEM158Q8WZ71 300 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 PDLIM5Q96HC4 596 aaKnown RBP14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 EGFL8Q99944 293 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 SORBS1Q9BX66 1292 aaKnown RBP14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 PIGMQ9H3S5 423 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 TSPY26PQ9H489 355 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 CLCF1Q9UBD9 225 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 ADGRE2Q9UHX3 823 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 ZKSCAN5Q9Y2L8 839 aa14.88□□□□□ -0.03
NECTIN1-202ENST00000340882 RNF223E7ERA6 249 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 CPN1P15169 458 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 PAX1P15863 534 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 CPN2P22792 545 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 GSTM2P28161 218 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 KCNC1P48547 511 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 ZNF267Q14586 743 aaPredicted RBP14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 ZNF460Q14592 562 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 ZNF474Q6S9Z5 364 aaPredicted RBP14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 SLC29A4Q7RTT9 530 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 CNTN4Q8IWV2 1026 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 BBOF1Q8ND07 529 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 WNT2BQ93097 391 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 RHBDF1Q96CC6 855 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 RBM18Q96H35 190 aaKnown RBP14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 ZFP3Q96NJ6 502 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 KCNC2Q96PR1 638 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 TM9SF2Q99805 663 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 PLAC1Q9HBJ0 212 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 PACSIN3Q9UKS6 424 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 VWA7Q9Y334 891 aa14.87□□□□□ -0.03
NECTIN1-202ENST00000340882 IQANK1A0A1B0GTG1 560 aa14.86□□□□□ -0.03
NECTIN1-202ENST00000340882 A0A1W2PNV4 684 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms