RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
ERCC1-203ENST00000340192 OR4K14Q8NGD5 310 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 CHTF18Q8WVB6 975 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 CAVIN3Q969G5 261 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 TM4SF18Q96CE8 201 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 LGALS13Q9UHV8 139 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 ERVK-19Q9WJR5 959 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 PCDHA9Q9Y5H5 950 aa13.54□□□□□ -0.24
ERCC1-203ENST00000340192 C1orf226A1L170 272 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 KLRC4-KLRK1H3BQV0 150 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 PEX1O43933 1283 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 ZNF354AO60765 605 aaPredicted RBP13.53□□□□□ -0.24
ERCC1-203ENST00000340192 ZNF24P17028 368 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 GALNSP34059 522 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 MEOX1P50221 254 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 XKP51811 444 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 GPR85P60893 370 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 HMGCS1Q01581 520 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 ASPHQ12797 758 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 MPEG1Q2M385 716 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 ZNF750Q32MQ0 723 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 PIGGQ5H8A4 983 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 C1QL3Q5VWW1 255 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 SLC48A1Q6P1K1 146 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 RNF111Q6ZNA4 994 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 TRABD2AQ86V40 505 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 SIAH3Q8IW03 269 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 MMP21Q8N119 569 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 PSD4Q8NDX1 1056 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 NUBPLQ8TB37 319 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 APOPT1Q96IL0 206 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 GPR137Q96N19 417 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 PARD6BQ9BYG5 372 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 CXorf21Q9HAI6 301 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 TIMMDC1Q9NPL8 285 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.53□□□□□ -0.24
ERCC1-203ENST00000340192 CES1P1Q9UKY3 287 aa13.53□□□□□ -0.24
ERCC1-203ENST00000340192 NPIPA5E9PKD4 350 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 CLPSP04118 112 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 GP1BBP13224 206 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 CPMP14384 443 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 RFC3P40938 356 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SLC37A1P57057 533 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 TRA2BP62995 288 aaKnown RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 RBPJQ06330 500 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 PCLAFQ15004 111 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 KRTCAP3Q53RY4 240 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SPIN4Q56A73 249 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 LIPMQ5VYY2 423 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 OPN5Q6U736 354 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SLC29A4Q7RTT9 530 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 FJX1Q86VR8 437 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 C10orf107Q8IVU9 208 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 GALNT12Q8IXK2 581 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SRRM1Q8IYB3 904 aaKnown RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 BANPQ8N9N5 519 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 POGLUT1Q8NBL1 392 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 APIPQ96GX9 242 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 GAL3ST4Q96RP7 486 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 WWTR1Q9GZV5 400 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 IQCGQ9H095 443 aaKnown RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 TNFRSF12AQ9NP84 129 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 DEPPQ9NTK1 212 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 MKS1Q9NXB0 559 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 MCM8Q9UJA3 840 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 NPIPA1Q9UND3 350 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 PLLPQ9Y342 182 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.25
ERCC1-203ENST00000340192 SPTAN1Q13813 2472 aaKnown RBP13.52□□□□□ -0.25
ERCC1-203ENST00000340192 A0A1B0GUH1 482 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 GNG14A0A1W2PPG7 69 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 SERTM1A2A2V5 107 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 OR6C76A6NM76 312 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 H3BQF6 201 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ASNA1O43681 348 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 PCDH7O60245 1069 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ERAL1O75616 437 aaKnown RBP13.51□□□□□ -0.25
ERCC1-203ENST00000340192 CT62P0C5K7 136 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 PORP16435 677 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-203ENST00000340192 SSTR4P31391 388 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 DEKP35659 375 aaKnown RBP13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ALDH9A1P49189 494 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 BTKQ06187 659 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ACSM2AQ08AH3 577 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 EBPQ15125 230 aaKnown RBP13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ACSM2BQ68CK6 577 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 RTL4Q6ZR62 310 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 MREGQ8N565 214 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 ZFP62Q8NB50 900 aaPredicted RBP13.51□□□□□ -0.25
ERCC1-203ENST00000340192 KLHL29Q96CT2 875 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 FAIM2Q9BWQ8 316 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 SLC17A7Q9P2U7 560 aa13.51□□□□□ -0.25
ERCC1-203ENST00000340192 PLEKHB1Q9UF11 243 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms