RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 MBD3L3A6NE82 208 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MBD3L5A6NJ08 208 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CD8B2A6NJW9 211 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 OR6C76A6NM76 312 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 FAM171A2A8MVW0 826 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 SH3BGRLO75368 114 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TRAPPC6AO75865 159 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HRGP04196 525 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HPNP05981 417 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 EPORP19235 508 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CTSSP25774 331 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 OPRM1P35372 400 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 RPL21P46778 160 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CDK9P50750 372 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 HERVK_113P63132 956 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ERVK-8P63133 956 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 NKX6-1P78426 367 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TNFRSF17Q02223 184 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 IRF8Q02556 426 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CHIT1Q13231 466 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MORF4L2Q15014 288 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 EBPQ15125 230 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TBCCQ15814 346 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 SHEQ5VZ18 495 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 GPSM1Q86YR5 675 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ST13P4Q8IZP2 240 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TAGAPQ8N103 731 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 MBD3L2Q8NHZ7 208 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ACTRT1Q8TDG2 376 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TANKQ92844 425 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 UBE2E3Q969T4 207 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 PELOQ9BRX2 385 aaKnown RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ERVK-6Q9BXR3 956 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 RHOJQ9H4E5 214 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ZNF395Q9H8N7 513 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-202ENST00000338325 NSMCE4AQ9NXX6 385 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 JKAMPQ9P055 326 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 PHF11Q9UIL8 331 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 ERVK-19Q9WJR5 959 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 SLC6A5Q9Y345 797 aa10.53□□□□□ -0.72
CSMD2-202ENST00000338325 CAPN14A8MX76 684 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 TP53I11O14683 189 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 WISP3O95389 354 aaPredicted RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 IL18BPO95998 194 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 TGFB1P01137 390 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 PCNAP12004 261 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 IVDP26440 423 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 CASP2P42575 452 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 AGFG1P52594 562 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SLC12A2P55011 1212 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SLC37A1P57057 533 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SLAMF1Q13291 335 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 E2F2Q14209 437 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 ZNF267Q14586 743 aaPredicted RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 POU4F3Q15319 338 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 RPS6KA2Q15349 733 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 NHSL2Q5HYW2 709 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 KHDRBS2Q5VWX1 349 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 VASNQ6EMK4 673 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 OR4C11Q6IEV9 310 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 MED27Q6P2C8 311 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SYDE1Q6ZW31 735 aaPredicted RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 LAS2Q8IYD9 372 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SPATA6LQ8N4H0 392 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 PDPRQ8NCN5 879 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 DOK4Q8TEW6 326 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 CMTM7Q96FZ5 175 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 RILPQ96NA2 401 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 OSBPL9Q96SU4 736 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 SORBS1Q9BX66 1292 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 UGT2B28Q9BY64 529 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 DDX47Q9H0S4 455 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 UBQLN3Q9H347 655 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 CD274Q9NZQ7 290 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 PPP2R2CQ9Y2T4 447 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 C15orf41Q9Y2V0 281 aa10.52□□□□□ -0.73
CSMD2-202ENST00000338325 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
CSMD2-202ENST00000338325 OR10H2O60403 315 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 PRKRAO75569 313 aaKnown RBP10.51□□□□□ -0.73
CSMD2-202ENST00000338325 SNX4O95219 450 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 ACSL3O95573 720 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 SERPINB1P30740 379 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 TLX1P31314 330 aaPredicted RBP10.51□□□□□ -0.73
CSMD2-202ENST00000338325 BUD31P41223 144 aaPredicted RBP10.51□□□□□ -0.73
CSMD2-202ENST00000338325 MASP1P48740 699 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 RAP1GDS1P52306 607 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 HNRNPH2P55795 449 aaKnown RBP10.51□□□□□ -0.73
CSMD2-202ENST00000338325 FBXW4P57775 412 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 POU4F1Q01851 419 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 ILF2Q12905 390 aaKnown RBP10.51□□□□□ -0.73
CSMD2-202ENST00000338325 OR4D1Q15615 310 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 DCST1Q5T197 706 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 C18orf63Q68DL7 685 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 BICRALQ6AI39 1079 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 LRRC70Q7Z2Q7 622 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 GPR180Q86V85 440 aa10.51□□□□□ -0.73
CSMD2-202ENST00000338325 PACS2Q86VP3 889 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms