RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TPRP12270 2363 aaKnown RBP11.13□□□□□ -0.63
SPTLC1-202ENST00000337841 A0A0G2JND7 137 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 MYO1GB0I1T2 1018 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 MKRN2OSH3BPM6 223 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 NTSP30990 170 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 CLCN2P51788 898 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 PGDP52209 483 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 CLNS1AP54105 237 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 IRX1P78414 480 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 SRSF11Q05519 484 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 CHAF1BQ13112 559 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF267Q14586 743 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 PTGR1Q14914 329 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF750Q32MQ0 723 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 RFWD2Q8NHY2 731 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 ZFP28Q8NHY6 868 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 COQ8BQ96D53 544 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 CNRIP1Q96F85 164 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF681Q96N22 645 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 ZNF317Q96PQ6 595 aaPredicted RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 DEFB126Q9BYW3 111 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 OR8D2Q9GZM6 311 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 CXorf21Q9HAI6 301 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 AIG1Q9NVV5 245 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 FAM53CQ9NYF3 392 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 COPS7AQ9UBW8 275 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 PPIEQ9UNP9 301 aaKnown RBP11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 TRIM33Q9UPN9 1127 aa11.12□□□□□ -0.63
SPTLC1-202ENST00000337841 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 A8MUI8 341 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 MASP2O00187 686 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 SCAMP2O15127 329 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 PDPK1O15530 556 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 ZFAND5O76080 213 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 ATP1B1P05026 303 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 SFTPCP11686 197 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 NCBP2P52298 156 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 ARFIP2P53365 341 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 GYS2P54840 703 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 MANFP55145 182 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 C21orf58P58505 322 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 STX1BP61266 288 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 GNGT1P63211 74 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 Q0VFX4 171 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 MAP4K2Q12851 820 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 PDE7AQ13946 482 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 CEBPEQ15744 281 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 SPRED3Q2MJR0 410 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 PGS1Q32NB8 556 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 AGAP7PQ5VUJ5 663 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 METTL21CQ5VZV1 264 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 CPZQ66K79 652 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 CPLX4Q7Z7G2 160 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 GALNT12Q8IXK2 581 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 RIMKLAQ8IXN7 391 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 KRTCAP2Q8N6L1 136 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 VPS37AQ8NEZ2 397 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 OR7A2PQ8NGA2 310 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 OR1N1Q8NGS0 311 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 SLC2A12Q8TD20 617 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 NCLNQ969V3 563 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 ZBED6CLQ96FA7 236 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 FBXL20Q96IG2 436 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 AGAP4Q96P64 663 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 EBF4Q9BQW3 602 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 SLC25A23Q9BV35 468 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 CNPPD1Q9BV87 410 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 BRINP2Q9C0B6 783 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 NSRP1Q9H0G5 558 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 TEKT2Q9UIF3 430 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
SPTLC1-202ENST00000337841 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 E9PBE3 544 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 SLC22A3O75751 556 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 CEACAM4O75871 244 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 BCAS2O75934 225 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 SLITRK5O94991 958 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 DDAH2O95865 285 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ALPPP05187 535 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ALDOCP09972 364 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 LAMP1P11279 417 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 NCF2P19878 526 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 LSP1P33241 339 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 S100A3P33764 101 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 GPR143P51810 404 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 POLE2P56282 527 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 UFM1P61960 85 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 PRSS53Q2L4Q9 553 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 DPY19L1Q2PZI1 675 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ANXA8L1Q5VT79 327 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 ANKRD26P1Q6NSI1 321 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 FAM180BQ6P0A1 224 aa11.1□□□□□ -0.63
SPTLC1-202ENST00000337841 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms