RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 OR2S2Q9NQN1 319 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 VNN3Q9NY84 501 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
COL2A1-201ENST00000337299 PYCR1P32322 319 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 RPL9P32969 192 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 YBX1P67809 324 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 SCAPQ12770 1279 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 GRK1Q15835 563 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF630Q2M218 657 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 REEP3Q6NUK4 255 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 CRTC1Q6UUV9 634 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ZSCAN1Q8NBB4 408 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 INO80EQ8NBZ0 244 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 TRMT61BQ9BVS5 477 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 TRPV4Q9HBA0 871 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 NOP16Q9Y3C1 178 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 HK3P52790 923 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 MAP4K2Q12851 820 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 PIN1Q13526 163 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 PRPF38BQ5VTL8 546 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 SLC27A4Q6P1M0 643 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 KDELC1Q6UW63 502 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 PAQR7Q86WK9 346 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 CD200R1Q8TD46 325 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 UBE2E3Q969T4 207 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 HRASLS5Q96KN8 279 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 SLC35G5Q96KT7 338 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 BHLHE41Q9C0J9 482 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 POLE3Q9NRF9 147 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ARL5CA6NH57 179 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 TARM1B6A8C7 271 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 PIRO00625 290 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 CREBL2O60519 120 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 HTR1AP08908 422 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 LAMP2P13473 410 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ZNF250P15622 560 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 M6PRP20645 277 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 MC2RQ01718 297 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 SERPINA12Q8IW75 414 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 RIMKLAQ8IXN7 391 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ST6GAL2Q96JF0 529 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 CAPNS2Q96L46 248 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 RLIMQ9NVW2 624 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 TXNL4BQ9NX01 149 aaKnown RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 CXXC1Q9P0U4 656 aaPredicted RBP12.65□□□□□ -0.38
COL2A1-201ENST00000337299 ACSL5Q9ULC5 683 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 HRH3Q9Y5N1 445 aa12.65□□□□□ -0.38
COL2A1-201ENST00000337299 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 H7C4K7 107 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 ARPC1BO15143 372 aaKnown RBP12.65□□□□□ -0.39
COL2A1-201ENST00000337299 MTHFD2P13995 350 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 OR1D2P34982 312 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 RPS25P62851 125 aaKnown RBP12.65□□□□□ -0.39
COL2A1-201ENST00000337299 PTPRRQ15256 657 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.39
COL2A1-201ENST00000337299 SAXO2Q658L1 398 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 ARHGAP12Q8IWW6 846 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 CHST4Q8NCG5 386 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 TMEM185AQ8NFB2 350 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 FKBP10Q96AY3 582 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 NDC1Q9BTX1 674 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 CARS2Q9HA77 564 aaKnown RBP12.65□□□□□ -0.39
COL2A1-201ENST00000337299 TLR6Q9Y2C9 796 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 PADI2Q9Y2J8 665 aa12.65□□□□□ -0.39
COL2A1-201ENST00000337299 ANXA2P2A6NMY6 339 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 LGALS8O00214 317 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 FLRT2O43155 660 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ANXA2P07355 339 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SNRPD1P62314 119 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SKP1P63208 163 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SELENOWP63302 87 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 OPCMLQ14982 345 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 KDM4DQ6B0I6 523 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 TCEAL4Q96EI5 215 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 PRMT8Q9NR22 394 aaPredicted RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 F8W036 122 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 RLN2P04090 185 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 UBL4AP11441 157 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 HPGDP15428 266 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 SOX2P48431 317 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 RNF144AP50876 292 aaPredicted RBP12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ADAM8P78325 824 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 BLOC1S1P78537 153 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 TSC22D1Q15714 1073 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 COL28A1Q2UY09 1125 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 ZNF311Q5JNZ3 666 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 PAQR6Q6TCH4 344 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 OR2A14Q96R47 310 aa12.64□□□□□ -0.39
COL2A1-201ENST00000337299 CPPED1Q9BRF8 314 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms