RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RGS9O75916 674 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 IL33O95760 270 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 CRYZL1O95825 349 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 PGCP20142 388 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 NRLP54845 237 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 BLOC1S1P78537 153 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 EVX2Q03828 476 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 DAZLQ92904 295 aaKnown RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 OR2M4Q96R27 311 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 GPRC5BQ9NZH0 403 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 SCAMP1O15126 338 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SLC26A5P58743 744 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 UGT3A2Q3SY77 523 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 MARVELD2Q8N4S9 558 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 DNAJC5Q9H3Z4 198 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 RBPJLQ9UBG7 517 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 NKX1-2Q9UD57 310 aaPredicted RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 TMEM131LA2VDJ0 1609 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CSF2P04141 144 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SFT2D3Q587I9 215 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 TXNDC8Q6A555 127 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 TMEM225Q6GV28 225 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 ZNF767PQ75MW2 155 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 OR51D1Q8NGF3 324 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 FAM46BQ96A09 425 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 PPIL3Q9H2H8 161 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 KLF15Q9UIH9 416 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 NME7Q9Y5B8 376 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 PPLO60437 1756 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 M0R2N6 131 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 EIF3FO00303 357 aaPredicted RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 CHRNB1P11230 501 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CERS1P27544 350 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 KCNQ1P51787 676 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 TDGQ13569 410 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CCINQ13939 588 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 OR5T1Q8NG75 326 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 TM9SF4Q92544 642 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 TXN2Q99757 166 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CCDC106Q9BWC9 280 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SLA2Q9H6Q3 261 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 ZFR2Q9UPR6 939 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 A0A1W2PPW3 197 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SOD2P04179 222 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 HK3P52790 923 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 RPS21P63220 83 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 PRKCZQ05513 592 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 GBX1Q14549 363 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 MLC1Q15049 377 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CHPT1Q8WUD6 406 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 STUB1Q9UNE7 303 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 YARS2Q9Y2Z4 477 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 CSTAP01040 98 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 JUPP14923 745 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 CDK2P24941 298 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 PER3P56645 1201 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 RPS3AP61247 264 aaKnown RBP12.54□□□□□ -0.4
HLCS-201ENST00000336648 KCNAB2Q13303 367 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 OR52E8Q6IFG1 317 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 NAPRTQ6XQN6 538 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 PQLC3Q8N755 202 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 VRTNQ9H8Y1 702 aa12.54□□□□□ -0.4
HLCS-201ENST00000336648 GDF5P43026 501 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 RPS15AP62244 130 aaKnown RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 MALLQ13021 153 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ERN2Q76MJ5 926 aaKnown RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 PROKR1Q8TCW9 393 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 HOXB13Q92826 284 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 SGTBQ96EQ0 304 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 NANSQ9NR45 359 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 TLR9Q9NR96 1032 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 AJAP1Q9UKB5 411 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 KCNK6Q9Y257 313 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ZNF175Q9Y473 711 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 GXYLT2A0PJZ3 443 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 ZNF705GA8MUZ8 300 aaPredicted RBP12.53□□□□□ -0.4
HLCS-201ENST00000336648 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 LCKP06239 509 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 UCHL1P09936 223 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CELP19835 753 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 EDNRBP24530 442 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 THBS2P35442 1172 aa12.53□□□□□ -0.4
HLCS-201ENST00000336648 CD97P48960 835 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms