RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR8J2Q8NGG1 315 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.3
SF1-202ENST00000334944 NUS1Q96E22 293 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 MAGEB10Q96LZ2 347 aaPredicted RBP13.21□□□□□ -0.3
SF1-202ENST00000334944 OR5M11Q96RB7 305 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 APOL4Q9BPW4 351 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 NXF2Q9GZY0 626 aaKnown RBP13.21□□□□□ -0.3
SF1-202ENST00000334944 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.3
SF1-202ENST00000334944 CDCP1Q9H5V8 836 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 MAGIXQ9H6Y5 334 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 SNTG1Q9NSN8 517 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 GPATCH2Q9NW75 528 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 MALT1Q9UDY8 824 aa13.21□□□□□ -0.3
SF1-202ENST00000334944 A0A0G2JN53 185 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 KIAA0355O15063 1070 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 FCER2P06734 321 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 SOAT1P35610 550 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 RGNQ15493 299 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 CAPN13Q6MZZ7 669 aaPredicted RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 SHQ1Q6PI26 577 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 ENTHD1Q8IYW4 607 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 ASB15Q8WXK1 588 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 KLK6Q92876 244 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 FBXW5Q969U6 566 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 ABCG4Q9H172 646 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 ZNF556Q9HAH1 456 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 SMURF1Q9HCE7 757 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 ABCB9Q9NP78 766 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 THUMPD1Q9NXG2 353 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 LRRK1Q38SD2 2015 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 GON4LQ3T8J9 2241 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 PIPSLA2A3N6 862 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 EFCAB10A6NFE3 127 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 HEPACAM2A8MVW5 462 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 EFCAB14O75071 495 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 POU2F1P14859 743 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 PSMB5P28074 263 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 TIA1P31483 386 aaKnown RBP eCLIP13.2□□□□□ -0.32e-7■■■■□ 24.6
SF1-202ENST00000334944 PTGER1P34995 402 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 IDH2P48735 452 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 TAP2Q03519 686 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 C2orf80Q0P641 193 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 TSTQ16762 297 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 TATDN3Q17R31 274 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 C9orf64Q5T6V5 341 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 CHTF18Q8WVB6 975 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 SMG7Q92540 1137 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 TRAF4Q9BUZ4 470 aaPredicted RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 LGR4Q9BXB1 951 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 ERVMER34-1Q9H9K5 563 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 FAM120CQ9NX05 1096 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 PCDHGB2Q9Y5G2 931 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
SF1-202ENST00000334944 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
SF1-202ENST00000334944 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 MPEG1Q2M385 716 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 FAM131AQ6UXB0 335 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 KIAA0907Q7Z7F0 614 aaPredicted RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 RASGRP3Q8IV61 690 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 FAM9CQ8IZT9 166 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
SF1-202ENST00000334944 COQ10AQ96MF6 247 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 RAD9AQ99638 391 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 J3KTA2 159 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SNX4O95219 450 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ADRB3P13945 408 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SDHBP21912 280 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 CSTF2P33240 577 aaKnown RBP eCLIP13.19□□□□□ -0.3
SF1-202ENST00000334944 MAGEA2P43356 314 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 RGS6P49758 472 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 GRM7Q14831 915 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SLC35A5Q9BS91 424 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 BARHL1Q9BZE3 327 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 REEP1Q9H902 201 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 RNF121Q9H920 327 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 CPNE7Q9UBL6 633 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 SLC6A14Q9UN76 642 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 DYRK1BQ9Y463 629 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 ALG5Q9Y673 324 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 V9GYH0 126 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 FEZF1A0PJY2 475 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 C1orf226A1L170 272 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 LILRB5O75023 590 aa13.19□□□□□ -0.3
SF1-202ENST00000334944 UGT2B17O75795 530 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms