RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 GK5Q6ZS86 529 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 CPEB2Q7Z5Q1 589 aaKnown RBP16.36■□□□□ 0.21
CHGA-202ENST00000334654 TREML1Q86YW5 311 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 PTPMT1Q8WUK0 201 aaPredicted RBP16.36■□□□□ 0.21
CHGA-202ENST00000334654 NACC2Q96BF6 587 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 ATAD3AQ9NVI7 634 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 ZNF780BQ9Y6R6 833 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 MED13Q9UHV7 2174 aa16.36■□□□□ 0.21
CHGA-202ENST00000334654 ASPDHA6ND91 283 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 PCDH17O14917 1159 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 PDPK1O15530 556 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 IL6P05231 212 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CT62P0C5K7 136 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CAPN3P20807 821 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 OTX2P32243 289 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 S100A3P33764 101 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 GALNSP34059 522 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 KIR3DL1P43629 444 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 OR4D2P58180 307 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 PCOLCEQ15113 449 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 LTB4RQ15722 352 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 SFT2D3Q587I9 215 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 ZNF551Q7Z340 670 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 SPACA3Q8IXA5 215 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 SAMD14Q8IZD0 417 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 LRRC25Q8N386 305 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 OR11G2Q8NGC1 345 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 METTL21AQ8WXB1 218 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 VPS33AQ96AX1 596 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 BBS4Q96RK4 519 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CCNL2Q96S94 520 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 TRIM4Q9C037 500 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 ACSS1Q9NUB1 689 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 ENTPD4Q9Y227 616 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 IGHV1-45A0A0A0MS14 117 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 A8MUA0 341 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 SLC22A2O15244 555 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 NKX2-8O15522 239 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 COX6A1P12074 109 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 S1PR1P21453 382 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 MPIP34949 423 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 GPR143P51810 404 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 MLC1Q15049 377 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 TLR1Q15399 786 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 ELAVL1Q15717 326 aaKnown RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 PRICKLE4Q2TBC4 344 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 ATP1A1-AS1Q5TC04 95 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 MRGPREQ86SM8 312 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 NATD1Q8N6N6 113 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 NFAM1Q8NET5 270 aaPredicted RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 DOK4Q8TEW6 326 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CTHRC1Q96CG8 243 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 RBM18Q96H35 190 aaKnown RBP16.35■□□□□ 0.21
CHGA-202ENST00000334654 DGAT2Q96PD7 388 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 ZNF700Q9H0M5 742 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 CXorf21Q9HAI6 301 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 ADAP2Q9NPF8 381 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 SERHLQ9NQF3 203 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 GIMAP4Q9NUV9 329 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 MRGBPQ9NV56 204 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 RAXQ9Y2V3 346 aa16.35■□□□□ 0.21
CHGA-202ENST00000334654 TPRP12270 2363 aaKnown RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 PRSS51A0A1B0GVH4 220 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 A0A1W2PRB8 838 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 SYNDIG1LA6NDD5 238 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 HRKO00198 91 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 RNASET2O00584 256 aaKnown RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 IFNA16P05015 189 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 NTSP30990 170 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 NCBP2P52298 156 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHGA-202ENST00000334654 PLIN5Q00G26 463 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 EEF1A2Q05639 463 aaKnown RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 MAP4K2Q12851 820 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 VPS26BQ4G0F5 336 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 TIGD2Q4W5G0 525 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 CRTC2Q53ET0 693 aaPredicted RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 ZNF628Q5EBL2 1059 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 FAM111BQ6SJ93 734 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 PROSER1Q86XN7 944 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 CLECL1Q8IZS7 167 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 FITM2Q8N6M3 262 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 C7orf57Q8NEG2 295 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 ADCY4Q8NFM4 1077 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 OR9A2Q8NGT5 310 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 IMMP1LQ96LU5 166 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 OR52E6Q96RD3 313 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 PELOQ9BRX2 385 aaKnown RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 SIRT3Q9NTG7 399 aaPredicted RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 WDR70Q9NW82 654 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 FAM120CQ9NX05 1096 aaKnown RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 C19orf25Q9UFG5 118 aaPredicted RBP16.34■□□□□ 0.21
CHGA-202ENST00000334654 ZNF639Q9UID6 485 aa16.34■□□□□ 0.21
CHGA-202ENST00000334654 PPIEQ9UNP9 301 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms