RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RPE65Q16518 533 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 TIGD6Q17RP2 521 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 TCEAL6Q6IPX3 200 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 METTL2BQ6P1Q9 378 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 CNTN4Q8IWV2 1026 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 TCEANCQ8N8B7 351 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF99A8MXY4 864 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ANHXE9PGG2 379 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 FAM227AF5H4B4 570 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 SGK494L7N484 410 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 EIF1AYO14602 144 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 RBMXL2O75526 392 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 P04436 131 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 PSMB5P28074 263 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 CTSL3PQ5NE16 218 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 SHISA6Q6ZSJ9 500 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 C9orf43Q8TAL5 461 aaPredicted RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 MYADMQ96S97 322 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 KNTC1P50748 2209 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 RPLP0P05388 317 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 OR12D2P58182 307 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ACOT4Q8N9L9 421 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 FAR1Q8WVX9 515 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 FATE1Q969F0 183 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ECHDC3Q96DC8 303 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 LGR4Q9BXB1 951 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 BRF2Q9HAW0 419 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ARHGEF15O94989 841 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 PGFP49763 221 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 ABHD17BQ5VST6 288 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 KCTD11Q693B1 232 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 SHQ1Q6PI26 577 aaKnown RBP14.3□□□□□ -0.12
C9orf47-201ENST00000334490 MINDY1Q8N5J2 469 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 GAL3ST3Q96A11 431 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 POT1Q9NUX5 634 aa14.3□□□□□ -0.12
C9orf47-201ENST00000334490 A0A1B0GVT2 93 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 PRODHO43272 600 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 TNFRSF21O75509 655 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 HK1P19367 917 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 XCR1P46094 333 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 AFF3P51826 1226 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 GINS1Q14691 196 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 RNF220Q5VTB9 566 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 FAM129BQ96TA1 746 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 HDAC8Q9BY41 377 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 CHMP1AQ9HD42 196 aaPredicted RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 SNTG1Q9NSN8 517 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 CLEC4EQ9ULY5 219 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 C17orf113A0A1B0GUU1 675 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 TFECO14948 347 aaPredicted RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 EDNRAP25101 427 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 EIF2DP41214 584 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 HSF2Q03933 536 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 C1orf94Q6P1W5 598 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 GNPDA2Q8TDQ7 276 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 KCNN1Q92952 543 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 TMEM19Q96HH6 336 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 MROH6A6NGR9 719 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF670-ZNF695F2Z2N8 137 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 PRAMEF2O60811 474 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 AZGP1P25311 298 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 CHAF1BQ13112 559 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 KLHL26Q53HC5 615 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 OGFOD2Q6N063 350 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 FAM174AQ8TBP5 190 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 SORBS1Q9BX66 1292 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 WDR12Q9GZL7 423 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 FAM240BA0A1B0GVZ2 78 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 J3QLW9 94 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ADORA3P0DMS8 318 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ZNF19P17023 458 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 TXNL4AP83876 142 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 PRDX1Q06830 199 aaKnown RBP14.29□□□□□ -0.12
C9orf47-201ENST00000334490 LRIT3Q3SXY7 679 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 KIAA1614Q5VZ46 1190 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 LMNTD1Q8N9Z9 388 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ADAMTS19Q8TE59 1207 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 ASB15Q8WXK1 588 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 DNAJC27Q9NZQ0 273 aa14.29□□□□□ -0.12
C9orf47-201ENST00000334490 SSC5DA1L4H1 1573 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 NPIPA2E9PIF3 369 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 NPIPA3F8WFD2 350 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 PPP6CO00743 305 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 FARS2O95363 451 aaKnown RBP14.28□□□□□ -0.12
C9orf47-201ENST00000334490 ETV4P43268 484 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 MAZP56270 477 aaKnown RBP14.28□□□□□ -0.12
C9orf47-201ENST00000334490 TRIM61Q5EBN2 209 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 FANK1Q8TC84 345 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 TMEM203Q969S6 136 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 ATOH8Q96SQ7 321 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 TRPV5Q9NQA5 729 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 TAS2R7Q9NYW3 318 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 PTRH2Q9Y3E5 179 aaKnown RBP14.28□□□□□ -0.12
C9orf47-201ENST00000334490 A0A1B0GTW7 788 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 TBX1O43435 398 aa14.28□□□□□ -0.12
C9orf47-201ENST00000334490 GPR37L1O60883 481 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms