RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 DCUN1D3Q8IWE4 304 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 LAS2Q8IYD9 372 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF461Q8TAF7 563 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 FNDC9Q8TBE3 224 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SCARB1Q8WTV0 552 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UPRTQ96BW1 309 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 PSD2Q9BQI7 771 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SRMSQ9H3Y6 488 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 PATZ1Q9HBE1 687 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SDHAF2Q9NX18 166 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 FBXW2Q9UKT8 454 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TIMM22Q9Y584 194 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CEPT1Q9Y6K0 416 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MUSKO15146 869 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC22A5O76082 557 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 C4BPAP04003 597 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RIDAP52758 137 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf94Q6P1W5 598 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MOB1BQ7L9L4 216 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TIPARPQ7Z3E1 657 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CNIH3Q8TBE1 160 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC5A11Q8WWX8 675 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DCUN1D4Q92564 292 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NEDD8-MDP1E9PL57 170 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ARVCFO00192 962 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CYB5BO43169 146 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UGDHO60701 494 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DIRAS1O95057 198 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NFATC1O95644 943 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 VIPP01282 170 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CKMT2P17540 419 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 STT3AP46977 705 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF84P51523 738 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RIN1Q13671 783 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 FGFBP1Q14512 234 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 GRIN2CQ14957 1233 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 GOLGA7Q7Z5G4 137 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 OR56B2PQ8NGI1 322 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 THAP7Q9BT49 309 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF286AQ9HBT8 521 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 IMP3Q9NV31 184 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZDHHC2Q9UIJ5 367 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 OARD1Q9Y530 152 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 KIDINS220Q9ULH0 1771 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MDFIC2A0A1B0GVS7 189 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 OR6C65A6NJZ3 312 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SPATA31D3P0C874 917 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SPATA31C1P0DKV0 1188 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CDK4P11802 303 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CLRN1P58418 232 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 KCNAB2Q13303 367 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CEACAM20Q6UY09 585 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SPATA31D4Q6ZUB0 917 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 VSIG10LQ86VR7 867 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 HAS2Q92819 552 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NIFKQ9BYG3 293 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 QTRT2Q9H974 415 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 WASH6PQ9NQA3 447 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NDRG3Q9UGV2 375 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF225Q9UK10 706 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RNF215Q9Y6U7 377 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 hCG_1807616A0A1W2PRN6 198 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF736B4DX44 427 aaPredicted RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CASC3O15234 703 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC43A1O75387 559 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CKMT1AP12532 417 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CNR1P21554 472 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MC1RQ01726 317 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC25A11Q02978 314 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DYRK1AQ13627 763 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 VARS2Q5ST30 1063 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC18B1Q6NT16 456 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 OR8S1Q8NH09 359 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TRMT10AQ8TBZ6 339 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CHTF18Q8WVB6 975 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TFAP2CQ92754 450 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RBPMSQ93062 196 aaKnown RBP5.3□□□□□ -1.56
PTPRB-202ENST00000334414 NIPSNAP3BQ9BS92 247 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 HOXD1Q9GZZ0 328 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 WDR26Q9H7D7 661 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 KCNK13Q9HB14 408 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 EPHA6Q9UF33 1036 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CHRNA9Q9UGM1 479 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 CYB5R1Q9UHQ9 305 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TCHHQ07283 1943 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 E7ESA3 106 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ARPC5O15511 151 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TOX4O94842 621 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 ALX3O95076 343 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SYPP08247 313 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TPMTP51580 245 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 TAS2R19P59542 299 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 MZT1Q08AG7 82 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 RAB35Q15286 201 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 SLC14A2Q15849 920 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 DCAF12L1Q5VU92 463 aa5.3□□□□□ -1.56
PTPRB-202ENST00000334414 UQCC3Q6UW78 93 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms