RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 LACTBL1A8MY62 500 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 M0R2N6 131 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NUPL2O15504 423 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 CH25HO95992 272 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 IL1AP01583 271 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 AMY2BP19961 511 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 MAKP20794 623 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 BRCC3P46736 316 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 OXA1LQ15070 435 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 UPP1Q16831 310 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FBXO48Q5FWF7 155 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 MED27Q6P2C8 311 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM111BQ6SJ93 734 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 MAP4K3Q8IVH8 894 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF439Q8NDP4 499 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FDXACB1Q9BRP7 624 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 GCM1Q9NP62 436 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 CACNA1EQ15878 2313 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM159BA6NKW6 160 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 WASH4PA8MWX3 477 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 RAB35Q15286 201 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 UGCGQ16739 394 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ZER1Q7Z7L7 766 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ARVCFO00192 962 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NCBP2P52298 156 aaKnown RBP eCLIP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 LASP1Q14847 261 aaKnown RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC36A3Q495N2 470 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 STRADAQ7RTN6 431 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 SYT14Q8NB59 555 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 RIC1Q4ADV7 1423 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 FER1L4A9Z1Z3 1794 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 TNFAIP8L2Q6P589 184 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NAT8LQ8N9F0 302 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 STYXQ8WUJ0 223 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC25A44Q96H78 314 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NIPSNAP3BQ9BS92 247 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NRCAMQ92823 1304 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF850A8MQ14 1090 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 VSTM5A8MXK1 200 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ZNF587BE7ETH6 402 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 CD34P28906 385 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 P2RX3P56373 397 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ATPAF1Q5TC12 328 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 BEND7Q8N7W2 519 aaPredicted RBP9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 NAT16Q8N8M0 369 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 ADIPOR1Q96A54 375 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 SDSLQ96GA7 329 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 TTTY10Q9BZA0 68 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 GSX2Q9BZM3 304 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 B3GAT2Q9NPZ5 323 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 PCDHGA7Q9Y5G6 932 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 MYO16Q9Y6X6 1858 aa9.94□□□□□ -0.82
SPTBN1-201ENST00000333896 CPED1A4D0V7 1026 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ACOT7O00154 380 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 FADS1O60427 444 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 IGFBP1P08833 259 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 PSEN2P49810 448 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 WDR77Q9BQA1 342 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3DA0A087WVF3 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3IA0A087WXS9 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3EA0A087X179 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3KA0A087X1G2 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3FA6NER0 549 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3LB9A6J9 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SMLR1H3BR10 107 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 NKRFO15226 690 aaKnown RBP eCLIP9.93□□□□□ -0.823e-12■□□□□ 9.1
SPTBN1-201ENST00000333896 ERCC1P07992 297 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3HP0C7X1 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MAT2AP31153 395 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 BIDP55957 195 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SCARB2Q14108 478 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3GQ6DHY5 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3CQ6IPX1 549 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RHBDF2Q6PJF5 856 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TBC1D3Q8IZP1 549 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 DTX3Q8N9I9 347 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 TMEM145Q8NBT3 493 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 MITD1Q8WV92 249 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 RNF141Q8WVD5 230 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SAP130Q9H0E3 1048 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CAPN5O15484 640 aaPredicted RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 SLC43A1O75387 559 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 FCGRTP55899 365 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 PDE12Q6L8Q7 609 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CNIH2Q6PI25 160 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 HBEGFQ99075 208 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 LDAHQ9H6V9 325 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 INTS6Q9UL03 887 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 NUMBLQ9Y6R0 609 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 NID2Q14112 1375 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 ENSAO43768 121 aaKnown RBP9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CREB1P16220 341 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 DPEP1P16444 411 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CTRB1P17538 263 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 KCNJ5P48544 419 aa9.93□□□□□ -0.82
SPTBN1-201ENST00000333896 CRYZQ08257 329 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms