RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 EEF1A2Q05639 463 aaKnown RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 RBBP4Q09028 425 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 EPS8Q12929 822 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 RUNX2Q13950 521 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 MYBPC3Q14896 1274 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 TEAD4Q15561 434 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 RBM48Q5RL73 367 aaKnown RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 BROXQ5VW32 411 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 TTC23Q5W5X9 447 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 EIF3MQ7L2H7 374 aaKnown RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 C6orf120Q7Z4R8 191 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 VTCN1Q7Z7D3 282 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SVOPLQ8N434 492 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 KLHL6Q8WZ60 621 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SERINC2Q96SA4 455 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 ING2Q9H160 280 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 FAM118AQ9NWS6 357 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 KCMF1Q9P0J7 381 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 hCG_2014768A0A024R1R8 64 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 A0A1B0GVT2 93 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 A0A1W2PPW3 197 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 MYO1GB0I1T2 1018 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SEC14L2O76054 403 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 PROS1P07225 676 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 C8orf89P0DMQ9 161 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 CRHBPP24387 322 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCT3P49368 545 aaKnown RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SCARB2Q14108 478 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SPIDRQ14159 915 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 TBC1D25Q3MII6 688 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SPDYE7PQ495Y7 208 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 FGD3Q5JSP0 725 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 XAF1Q6GPH4 301 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCDC116Q8IYX3 515 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 C8orf59Q8N0T1 100 aaPredicted RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SDR16C5Q8N3Y7 309 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 NFKBIDQ8NI38 313 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SUN3Q8TAQ9 357 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SDCCAG3Q96C92 435 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 MBOAT4Q96T53 435 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 ROGDIQ9GZN7 287 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMEM74BQ9NUR3 256 aa19.13■□□□□ 0.65
RIPPLY3-201ENST00000329553 SH3PXD2BA1X283 911 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZSCAN9O15535 394 aaPredicted RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 PFDN1O60925 122 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ABCB7O75027 752 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 MATN1P21941 496 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 NTSP30990 170 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 HOXA6P31267 233 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 PTGER1P34995 402 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 FEN1P39748 380 aaKnown RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 IST1P53990 364 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMBIM6P55061 237 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 VSX2P58304 361 aaPredicted RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 CDK6Q00534 326 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 SIM2Q14190 667 aaPredicted RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ABHD13Q7L211 337 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZC3H7AQ8IWR0 971 aaKnown RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 HORMAD2Q8N7B1 307 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 HSPBAP1Q96EW2 488 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 SMURF2Q9HAU4 748 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 STARD5Q9NSY2 213 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 LILRA5A6NI73 299 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 SLC9B1P1A6NJY1 282 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 CTSBP07858 339 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ALPPL2P10696 532 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ALOX12P18054 663 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 EEF1B2P24534 225 aaKnown RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 GPC1P35052 558 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 DSTNP60981 165 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 TUBA3CQ13748 450 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 MANEAQ5SRI9 462 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 CEACAM20Q6UY09 585 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 PRSS41Q7RTY9 318 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZDHHC21Q8IVQ6 265 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 CSNK1A1LQ8N752 337 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 TBC1D15Q8TC07 691 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 HDAC2Q92769 488 aaKnown RBP19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 HSH2DQ96JZ2 352 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 MAP3K3Q99759 626 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 AMBRA1Q9C0C7 1298 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 FANCEQ9HB96 536 aa19.12■□□□□ 0.65
RIPPLY3-201ENST00000329553 TP53BP1Q12888 1972 aaPredicted RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 CCDC163A0A0D9SF12 145 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 TMEM229AB2RXF0 380 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 B3GALT2O43825 422 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 SEMG1P04279 462 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 ARAFP10398 606 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 NR2F6P10588 404 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 HOXB6P17509 224 aaKnown RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 CD247P20963 164 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 MAGEA2P43356 314 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 CAPZBP47756 277 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 LIM2P55344 173 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 BNIP3Q12983 259 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 DEFB110Q30KQ9 67 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 C14orf28Q4W4Y0 310 aa19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 TNFAIP8L2Q6P589 184 aaPredicted RBP19.11■□□□□ 0.65
RIPPLY3-201ENST00000329553 ZNF655Q8N720 491 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms