RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 DDCP20711 480 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 GSK3BP49841 420 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 TAS2R50P59544 299 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 PHC1P78364 1004 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 LY6DQ14210 128 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 ERV3-1Q14264 604 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC9A5Q14940 896 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 OR4F3Q6IEY1 312 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 FAM198BQ6UWH4 519 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 GPR135Q8IZ08 494 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 SHISA5Q8N114 240 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 OR7A2PQ8NGA2 310 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 GAL3ST3Q96A11 431 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 KIAA1143Q96AT1 154 aaPredicted RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 TM4SF19Q96DZ7 209 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 RSRC1Q96IZ7 334 aaKnown RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 PANX1Q96RD7 426 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 THUMPD3Q9BV44 507 aaKnown RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF717Q9BY31 904 aaPredicted RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC6A16Q9GZN6 736 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 RAD21L1Q9H4I0 556 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 MIEF1Q9NQG6 463 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 LYARQ9NX58 379 aaKnown RBP15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 VAPAQ9P0L0 249 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 PCDHB14Q9Y5E9 798 aa15.49■□□□□ 0.07
PDLIM1-201ENST00000329399 TCRBV3S1A0A5B6 114 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 H0YGG7 62 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 SCELO95171 688 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 LRATO95237 230 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ABCB1P08183 1280 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 HOXB9P17482 250 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 WNT3P56703 355 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ARF3P61204 181 aaPredicted RBP15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 IL10RAQ13651 578 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 RHBDD2Q6NTF9 364 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 NIPAL1Q6NVV3 410 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ERICH5Q6P6B1 374 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 RNF44Q7L0R7 432 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ASPGQ86U10 573 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 RNF148Q8N7C7 305 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 MS4A6EQ96DS6 147 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 OR2A5Q96R48 311 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ZFYVE21Q9BQ24 234 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 MACROD1Q9BQ69 325 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 NLNQ9BYT8 704 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 SH3BP4Q9P0V3 963 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 SLAMF8Q9P0V8 285 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 VPS4AQ9UN37 437 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 FARSAQ9Y285 508 aaKnown RBP15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 PCDHGA6Q9Y5G7 932 aa15.48■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF462Q96JM2 2506 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 A0A0A6YYD5 115 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 ZNF891A8MT65 544 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 CREG1O75629 220 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 EIF2S1P05198 315 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 GPIP06744 558 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 LAMP1P11279 417 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 TCN1P20061 433 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 ALAS2P22557 587 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 PTPN6P29350 595 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 SLC7A1P30825 629 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 VHLP40337 213 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 SSR2P43308 183 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 MAGEA8P43361 318 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 RABL3Q5HYI8 236 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 ZC3H12BQ5HYM0 836 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 ABHD17CQ6PCB6 329 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 TTLL10Q6ZVT0 673 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 SERPINA11Q86U17 422 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 SPATA24Q86W54 205 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 METTL27Q8N6F8 245 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 OR2T12Q8NG77 320 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 CDC26Q8NHZ8 85 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 GFM2Q969S9 779 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 RERGQ96A58 199 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 TM4SF18Q96CE8 201 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 CPPED1Q9BRF8 314 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 KAT8Q9H7Z6 458 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 GORASP2Q9H8Y8 452 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 ENAMQ9NRM1 1142 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 IRAK4Q9NWZ3 460 aa15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 NKX1-2Q9UD57 310 aaPredicted RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 PRRC2CQ9Y520 2896 aaKnown RBP15.47■□□□□ 0.07
PDLIM1-201ENST00000329399 PCSK5Q92824 1860 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 FITM1A5D6W6 292 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 FAM220BPB1ANY3 271 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 H0Y3Z8 333 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 P2RX6O15547 441 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 SORBS2O94875 1100 aaKnown RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 KLK3P07288 261 aaPredicted RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 FAM87AP0C7U9 286 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 PIM1P11309 404 aaPredicted RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 GPX2P18283 190 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 HIST1H1TP22492 207 aaPredicted RBP15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 CDC20Q12834 499 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 MLC1Q15049 377 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 DEFB109BQ30KR1 87 aa15.46■□□□□ 0.07
PDLIM1-201ENST00000329399 TLDC1Q6P9B6 456 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms