RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C1orf226A1L170 272 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 WIPF3A6NGB9 483 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 HRKO00198 91 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 LRRTM2O43300 516 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 OR6B1O95007 311 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 ZNF24P17028 368 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 SOX3P41225 446 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 PER3P56645 1201 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 TRA2BP62995 288 aaKnown RBP25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 MPEG1Q2M385 716 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 OPN5Q6U736 354 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 FRMD7Q6ZUT3 714 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 MDGA2Q7Z553 956 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 SULF2Q8IWU5 870 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 C9orf40Q8IXQ3 194 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 CPSF7Q8N684 471 aaKnown RBP25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 TM4SF18Q96CE8 201 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 GPR137Q96N19 417 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 ACPTQ9BZG2 426 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 IQCGQ9H095 443 aaKnown RBP25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 TIMM22Q9Y584 194 aa25.6■■□□□ 1.69
ATPAF1-201ENST00000329231 NPIPA5E9PKD4 350 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 PEX1O43933 1283 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 RNF224P0DH78 156 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 GP1BBP13224 206 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 MEOX1P50221 254 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 HTR6P50406 440 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 XKP51811 444 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 RNF111Q6ZNA4 994 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 SLC29A4Q7RTT9 530 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 PSD4Q8NDX1 1056 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 DOK4Q8TEW6 326 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 KCNA7Q96RP8 456 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 FAIM2Q9BWQ8 316 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 C12orf65Q9H3J6 166 aaKnown RBP25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 CXorf21Q9HAI6 301 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 MCM8Q9UJA3 840 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 PSME2Q9UL46 239 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 NPIPA1Q9UND3 350 aa25.59■■□□□ 1.69
ATPAF1-201ENST00000329231 UBFD1O14562 309 aaKnown RBP25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 CHN1P15882 459 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 ASPHQ12797 758 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SPIN4Q56A73 249 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 PIGGQ5H8A4 983 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 C6orf163Q5TEZ5 329 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SLC48A1Q6P1K1 146 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SIAH3Q8IW03 269 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 GALNT12Q8IXK2 581 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SLC22A8Q8TCC7 542 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SGCZQ96LD1 299 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 TSPAN10Q9H1Z9 355 aaPredicted RBP25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 RYDENQ9NUL5 291 aaKnown RBP25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 MKS1Q9NXB0 559 aa25.58■■□□□ 1.69
ATPAF1-201ENST00000329231 SERTM1A2A2V5 107 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 GOLGA6L10A6NI86 522 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 OR6C76A6NM76 312 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 CRCPO75575 148 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 CPMP14384 443 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 PORP16435 677 aaPredicted RBP25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 SLC37A1P57057 533 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 ACSM2AQ08AH3 577 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 LIPMQ5VYY2 423 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 ACSM2BQ68CK6 577 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 RTL4Q6ZR62 310 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 TRABD2AQ86V40 505 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 APOPT1Q96IL0 206 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 CES1P1Q9UKY3 287 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 PLLPQ9Y342 182 aa25.57■■□□□ 1.68
ATPAF1-201ENST00000329231 USP9YO00507 2555 aaPredicted RBP25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 A0A1W2PS29 197 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 ASNA1O43681 348 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 WISP2O76076 250 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 GPR85P60893 370 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 HMGCS1Q01581 520 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 RNFT1Q5M7Z0 435 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 C1QL3Q5VWW1 255 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 SLC15A4Q8N697 577 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 GOLM1Q8NBJ4 401 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 RELTQ969Z4 430 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 GAL3ST4Q96RP7 486 aa25.56■■□□□ 1.68
ATPAF1-201ENST00000329231 GNG14A0A1W2PPG7 69 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 PCDH7O60245 1069 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 CASP6P55212 293 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 FOXA1P55317 472 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 FJX1Q86VR8 437 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 SRRM1Q8IYB3 904 aaKnown RBP25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 BANPQ8N9N5 519 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 ZFP62Q8NB50 900 aaPredicted RBP25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 MAGED4Q96JG8 741 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 WWTR1Q9GZV5 400 aa25.55■■□□□ 1.68
ATPAF1-201ENST00000329231 TRGV8A0A0C4DH27 118 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 TFECO14948 347 aaPredicted RBP25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 ZNF354AO60765 605 aaPredicted RBP25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 SLC19A2O60779 497 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 ERLIN1O75477 346 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 ERAL1O75616 437 aaKnown RBP25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 CSNK2A2P19784 350 aaPredicted RBP25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 NT5EP21589 574 aa25.54■■□□□ 1.68
ATPAF1-201ENST00000329231 ALDH9A1P49189 494 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms