RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 KCTD13Q8WZ19 329 aa11.3□□□□□ -0.6
SHMT2-201ENST00000328923 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
SHMT2-201ENST00000328923 TMEM41AQ96HV5 264 aa11.3□□□□□ -0.6
SHMT2-201ENST00000328923 HRASLS5Q96KN8 279 aa11.3□□□□□ -0.6
SHMT2-201ENST00000328923 THUMPD3Q9BV44 507 aaKnown RBP11.3□□□□□ -0.6
SHMT2-201ENST00000328923 VAPAQ9P0L0 249 aa11.3□□□□□ -0.6
SHMT2-201ENST00000328923 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ARVCFO00192 962 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MOCS2O96007 188 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 VTNP04004 478 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ALDOBP05062 364 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ALPIP09923 528 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 SMPD1P17405 629 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 GABRB1P18505 474 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 G0S2P27469 103 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 SELENOPP49908 381 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 RIPPLY1Q0D2K3 151 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ECH1Q13011 328 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 LCP2Q13094 533 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 NR6A1Q15406 480 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 XKR7Q5GH72 579 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MSANTD2Q6P1R3 559 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 DPPA2Q7Z7J5 298 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PDZD9Q8IXQ8 264 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PTGR2Q8N8N7 351 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 CAMKVQ8NCB2 501 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 CHST14Q8NCH0 376 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 OR8J3Q8NGG0 315 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 RHEBL1Q8TAI7 183 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 SCARB1Q8WTV0 552 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 EMID1Q96A84 441 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 NSUN5Q96P11 429 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PTPN18Q99952 460 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 FICDQ9BVA6 458 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 METTL17Q9H7H0 456 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 FBXW11Q9UKB1 542 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 IRAK3Q9Y616 596 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 CFAP20Q9Y6A4 193 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ELOVL7A1L3X0 281 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 CCDC85CA6NKD9 419 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ARNTLO00327 626 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 IFRD1O00458 451 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 CLDN4O14493 209 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ICOSLGO75144 302 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 NR2C1P13056 603 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ARF4P18085 180 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PTBP1P26599 531 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MAGEA2P43356 314 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ZP1P60852 638 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 GRB14Q14449 540 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MLIPQ5VWP3 458 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 OR2T5Q6IEZ7 315 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 TMEM91Q6ZNR0 172 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 ZFAND4Q86XD8 727 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 KLBQ86Z14 1044 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 OR2T29Q8NH02 315 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 TADA1Q96BN2 335 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MRPL38Q96DV4 380 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
SHMT2-201ENST00000328923 SOSTQ9BQB4 213 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MAGIXQ9H6Y5 334 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 MS4A12Q9NXJ0 267 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
SHMT2-201ENST00000328923 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
SHMT2-201ENST00000328923 E9PI62 339 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SGK494L7N484 410 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 UBE2CO00762 179 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 HSPA7P48741 367 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 CTBP2P56545 445 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 NCF4Q15080 339 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 FAM110CQ1W6H9 321 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 HSDL2Q6YN16 418 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 RTL10Q7L3V2 364 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 PROKR1Q8TCW9 393 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 SOX7Q9BT81 388 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 HDHD2Q9H0R4 259 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 POPDC3Q9HBV1 291 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 CRTAC1Q9NQ79 661 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 TREM2Q9NZC2 230 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 PHF11Q9UIL8 331 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 HYKKA2RU49 373 aa11.28□□□□□ -0.6
SHMT2-201ENST00000328923 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms