RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ZIM2Q9NZV7 527 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 GPR45Q9Y5Y3 372 aa13.18□□□□□ -0.3
CMTM1-201ENST00000328020 ARGFXA6NJG6 315 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 A8MUA0 341 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 SEC24DO94855 1032 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ATP1B1P05026 303 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ALDOCP09972 364 aaKnown RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 NT5EP21589 574 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ATP4BP51164 291 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 SEC24CP53992 1094 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 PCOLCEQ15113 449 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 BTBD16Q32M84 506 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ANXA8L1Q5VT79 327 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 PLAG1Q6DJT9 500 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 BORAQ6PGQ7 559 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 SHISA5Q8N114 240 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 MMP21Q8N119 569 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 TESCQ96BS2 214 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 COQ8BQ96D53 544 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ERP27Q96DN0 273 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 BHLHE41Q9C0J9 482 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ING2Q9H160 280 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 EPN3Q9H201 632 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 SDR39U1Q9NRG7 319 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ACSS1Q9NUB1 689 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-201ENST00000328020 C5AR2Q9P296 337 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 ADAM21Q9UKJ8 722 aa13.17□□□□□ -0.3
CMTM1-201ENST00000328020 IGHV3-20A0A0C4DH32 117 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 WASHC1A8K0Z3 465 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 MYO1GB0I1T2 1018 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 TGFBR3LH3BV60 316 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 BCAS2O75934 225 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 IL6P05231 212 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 SERPINA7P05543 415 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 S100A3P33764 101 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 KIR3DL1P43629 444 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 MRPL19P49406 292 aaKnown RBP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 PGDP52209 483 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 NCBP2P52298 156 aaKnown RBP eCLIP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 EFNA3P52797 238 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 MANFP55145 182 aaKnown RBP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 SLC26A5P58743 744 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 SQLEQ14534 574 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CEBPEQ15744 281 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CPZQ66K79 652 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 GPR155Q7Z3F1 870 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CAMKMTQ7Z624 323 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 APLFQ8IW19 511 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 KRTCAP2Q8N6L1 136 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 B3GNT7Q8NFL0 401 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 UCN3Q969E3 161 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 VMP1Q96GC9 406 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
CMTM1-201ENST00000328020 DUSP26Q9BV47 211 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 KCNK13Q9HB14 408 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 MMP25Q9NPA2 562 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 TEKT2Q9UIF3 430 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 PCDHGB4Q9UN71 923 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CFL2Q9Y281 166 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CLDN16Q9Y5I7 305 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
CMTM1-201ENST00000328020 CNTRLQ7Z7A1 2325 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 DRD4P21917 467 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 ITGA3P26006 1051 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 GPC1P35052 558 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 CLCN2P51788 898 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 NME5P56597 212 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 UFM1P61960 85 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 ZNF267Q14586 743 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-201ENST00000328020 ANKRD26P1Q6NSI1 321 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 CGB2Q6NT52 195 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 OR7G1Q8NGA0 311 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 OR7A2PQ8NGA2 310 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 ZNF675Q8TD23 568 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 PTPMT1Q8WUK0 201 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-201ENST00000328020 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
CMTM1-201ENST00000328020 SENP5Q96HI0 755 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-201ENST00000328020 MARK4Q96L34 752 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 ZNF681Q96N22 645 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 AMDHD1Q96NU7 426 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 WDR77Q9BQA1 342 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-201ENST00000328020 CNPPD1Q9BV87 410 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 OR8D2Q9GZM6 311 aa13.15□□□□□ -0.3
CMTM1-201ENST00000328020 LHPPQ9H008 270 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms