RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MYNNQ9NPC7 610 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SLAMF7Q9NQ25 335 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PLCXD1Q9NUJ7 323 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 MUTYHQ9UIF7 546 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF232Q9UNY5 417 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 CSO75390 466 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PDE9AO76083 593 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ACVR2AP27037 513 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 RAB8AP61006 207 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 DBPQ10586 325 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SSX1Q16384 188 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TRIQKQ629K1 86 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC9B2Q86UD5 537 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 CCDC116Q8IYX3 515 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SLC7A13Q8TCU3 470 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TMCO6Q96DC7 493 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TBX5Q99593 518 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 TMED9Q9BVK6 235 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 MVB12BQ9H7P6 319 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 PCDHGA3Q9Y5H0 932 aa12.24□□□□□ -0.45
HMGCS1-201ENST00000325110 SCN5AQ14524 2016 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CPSF4LA6NMK7 179 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ADRA2AP08913 450 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CBLP22681 906 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 PRKCDQ05655 676 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF750Q32MQ0 723 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF544Q6NX49 715 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 FAM83HQ6ZRV2 1179 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 LACC1Q8IV20 430 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 C19orf18Q8NEA5 215 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 OR4C15Q8NGM1 316 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TEX47Q8TBZ9 253 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 OR8D1Q8WZ84 308 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 OPALINQ96PE5 141 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 MND1Q9BWT6 205 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CNIH4Q9P003 139 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 GSAPA4D1B5 854 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TMEM229AB2RXF0 380 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 PRNPP04156 253 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 EPHX1P07099 455 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 PTPN2P17706 415 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ELAVL4P26378 380 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CTNNB1P35222 781 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF57Q68EA5 555 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TCTN3Q6NUS6 607 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 B3GLCTQ6Y288 498 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF730Q6ZMV8 503 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 DTD2Q96FN9 168 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 WFDC6Q9BQY6 131 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CHST8Q9H2A9 424 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CCDC59Q9P031 241 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 TBC1D14Q9P2M4 693 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 KCNK6Q9Y257 313 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 PPIL1Q9Y3C6 166 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CNTRLQ7Z7A1 2325 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 A0A1W2PQL4 384 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 FFAR1O14842 300 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ADAP00813 363 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 KELP23276 732 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 NTSP30990 170 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 IFNA8P32881 189 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 SDC2P34741 201 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 PPM1FP49593 454 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 SCN1BQ07699 218 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 MESP2Q0VG99 397 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 AGAP6Q5VW22 663 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 KHDRBS2Q5VWX1 349 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 LINC00299Q6ZSB3 139 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 DPPA4Q7L190 304 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 NUDT13Q86X67 352 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 OR8J1Q8NGP2 316 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF296Q8WUU4 475 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CXorf40BQ96DE9 158 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 AGAP4Q96P64 663 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 EGLN3Q9H6Z9 239 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CACYBPQ9HB71 228 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 THSD1Q9NS62 852 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 H2AFY2Q9P0M6 372 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CLCA2Q9UQC9 943 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 CEP290O15078 2479 aa12.23□□□□□ -0.45
HMGCS1-201ENST00000325110 ARID1BQ8NFD5 2236 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ANTXRLA6NF34 631 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ZAR1LA6NP61 321 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 CAPN5O15484 640 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ERI3O43414 337 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 TSC22D2O75157 780 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 RB1P06400 928 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ERVFC1P60507 584 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 RPS7P62081 194 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 ZNF33BQ06732 778 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 DHCR24Q15392 516 aa12.22□□□□□ -0.45
HMGCS1-201ENST00000325110 PODNL1Q6PEZ8 512 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms