RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MFSD9Q8NBP5 474 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 OR4C15Q8NGM1 316 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PSMA8Q8TAA3 256 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ZNF420Q8TAQ5 688 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 PROX1Q92786 737 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 SLC22A18Q96BI1 424 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 COL21A1Q96P44 957 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 TREX2Q9BQ50 279 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 RHNO1Q9BSD3 238 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 RSPO3Q9BXY4 272 aaPredicted RBP7.16□□□□□ -1.26
IFT88-201ENST00000319980 ANKRA2Q9H9E1 313 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 ENPP4Q9Y6X5 453 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 HSPE1-MOB4S4R3N1 261 aa7.16□□□□□ -1.26
IFT88-201ENST00000319980 A0A0J9YVX5 310 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 A0A1W2PPW3 197 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 A6NCN8 305 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 OR6C74A6NCV1 312 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 SHISA7A6NL88 538 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 TNFRSF10CO14798 259 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 MAN1A2O60476 641 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 DNAJB5O75953 348 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 SEC14L2O76054 403 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 VIPP01282 170 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 HMGN2P05204 90 aaKnown RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 NR2F1P10589 423 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 ANXA8P13928 327 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 JUNBP17275 347 aaPredicted RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 RHCEP18577 417 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 LIM2P55344 173 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 SNRPNP63162 240 aaKnown RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 KCNC4Q03721 635 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 EMX1Q04741 257 aaPredicted RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 DUSP2Q05923 314 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 GPR18Q14330 331 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 LASP1Q14847 261 aaKnown RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 MAD2L1BPQ15013 274 aaPredicted RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 FBXO42Q6P3S6 717 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 Q7L0L9 218 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 VN1R4Q7Z5H5 301 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 HMGN2P46Q86SG4 172 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 PAQR7Q86WK9 346 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 NRROSQ86YC3 692 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 TAGAPQ8N103 731 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 ZNF540Q8NDQ6 660 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 GPR32P1Q8NGA4 272 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 VANGL1Q8TAA9 524 aaPredicted RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 SUN3Q8TAQ9 357 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 GTPBP3Q969Y2 492 aaKnown RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 HRASLS5Q96KN8 279 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 SLC35G5Q96KT7 338 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 MAPKAP1Q9BPZ7 522 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 IRF2BPLQ9H1B7 796 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 TCEAL2Q9H3H9 227 aaPredicted RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 TRNAU1APQ9NX07 287 aaKnown RBP7.15□□□□□ -1.26
IFT88-201ENST00000319980 SCN3BQ9NY72 215 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 ERVK-18Q9QC07 812 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 SEC14L3Q9UDX4 400 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 CYP8B1Q9UNU6 501 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 ENTPD4Q9Y227 616 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 TPRKBQ9Y3C4 175 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 PCDHGA6Q9Y5G7 932 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 MYO10Q9HD67 2058 aa7.15□□□□□ -1.26
IFT88-201ENST00000319980 PRAMEF27A3QJZ7 478 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 FFAR1O14842 300 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 PROM1O43490 865 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 ZNF888P0CJ79 500 aaPredicted RBP7.15□□□□□ -1.27
IFT88-201ENST00000319980 MPIP34949 423 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 IDH2P48735 452 aaKnown RBP7.15□□□□□ -1.27
IFT88-201ENST00000319980 RPS15AP62244 130 aaKnown RBP7.15□□□□□ -1.27
IFT88-201ENST00000319980 YPEL5P62699 121 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 NPTX1Q15818 432 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 PROX2Q3B8N5 592 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 FGD3Q5JSP0 725 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 GTF2IRD2BQ6EKJ0 949 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 SLC48A1Q6P1K1 146 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 TMEM107Q6UX40 140 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 GTF2IRD2Q86UP8 949 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 RBM45Q8IUH3 476 aaKnown RBP7.15□□□□□ -1.27
IFT88-201ENST00000319980 ENTHD1Q8IYW4 607 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 SLC22A18ASQ8N1D0 253 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 UTP15Q8TED0 518 aaKnown RBP7.15□□□□□ -1.27
IFT88-201ENST00000319980 DNASE1L2Q92874 299 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 ZNF566Q969W8 418 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 ALPK1Q96QP1 1244 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 OR2A14Q96R47 310 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 ZNF607Q96SK3 696 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 ZNF556Q9HAH1 456 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 P2RX2Q9UBL9 471 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 PLXND1Q9Y4D7 1925 aa7.15□□□□□ -1.27
IFT88-201ENST00000319980 FAM227AF5H4B4 570 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CTSVO60911 334 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NOL3O60936 208 aaKnown RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 SEMA7AO75326 666 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 NME6O75414 186 aaPredicted RBP7.14□□□□□ -1.27
IFT88-201ENST00000319980 SERPINB7O75635 380 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 PDE9AO76083 593 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 INMTO95050 263 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 SLC35G6P0C7Q6 338 aa7.14□□□□□ -1.27
IFT88-201ENST00000319980 CSNK2A2P19784 350 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms